Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq7505 181 1e-40
seq195 145 9e-30
seq16992 86.0 7e-12
>seq7505
Length=7180
Score = 181 bits (200), Expect = 1e-40
Identities = 162/203 (80%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| || || ||||| || |||||| || | ||||| || |||||||
Sbjct 3700 ACTGGGAAGACAATCACCCTTGAAGTCGAGTCATCAGACACCATTGATAACGTGAAGGCC 3641
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||| |||||||| || || ||||| |||||||| || | || ||||||||||||
Sbjct 3640 AAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAGCAACGCTTGATCTTTGCTGGTAAG 3581
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
||||| ||||||| |||||||| |||||||| || |||||||||| || ||| | ||
Sbjct 3580 CAACTTGAGGATGGACGTACCCTTGCAGACTACAACATCCAAAAGGAGTCTACTTTGCAC 3521
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||||||||||||||||||
Sbjct 3520 CTCGTCTTGCGTCTTCGCGGTGG 3498
Score = 165 bits (182), Expect = 9e-36
Identities = 170/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTT-ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||| | |||| ||||| || || |||||| | || || || || ||| | ||
Sbjct 1984 TTTCTCAACA-GCTTGACCGGTAAAACCATTACTTTGGAAGTGGAATCGTCTGACACAAT 1926
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| |||||||||||||||||||||| ||||| || || || || |||||||||||
Sbjct 1925 TGACAATGTGAAGGCTAAAATTCAGGACAAAGAGGGCATCCCGCCTGATCAGCAGCGTCT 1866
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
||||| |||||||| ||||| ||||||| || || | ||||| ||||| | |||||
Sbjct 1865 CATTTTCGCTGGTAAACAACTTGAGGATGGCCGAACATTGGCAGATTATAACATTCAAAA 1806
Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| || |||||||||||||| | ||||| || || |||
Sbjct 1805 AGAGTCAACTCTTCATCTAGTTCTCCGTCTCCGTGGAGGA 1766
Score = 159 bits (176), Expect = 4e-34
Identities = 161/208 (77%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 27426 GCTTA-CCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGA 27484
||||| |||||||||||||||| || |||||||| || |||| |||| ||| | |
Sbjct 3131 GCTTAACCGGCAAGACTATTACACTCGAGGTTGAATCCTCCGATACGATTGATAATGTCA 3072
Query 27485 AGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTG 27544
|||| || || || |||||||| || ||||| ||||| |||||||| | || |||||||
Sbjct 3071 AGGCAAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAGCAGCGATTGATCTTTGCTG 3012
Query 27545 GTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTC 27604
|||| ||||| || |||| ||||||||||| || || || | ||||||||||| |||
Sbjct 3011 GTAAACAACTAGAAGATGGCCGTACCCTAGCTGATTACAACATTCAAAAGGAATCTACTT 2952
Query 27605 TTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || | ||||| || || ||
Sbjct 2951 TGCATCTCGTGCTCCGTCTACGTGGAGG 2924
Score = 150 bits (166), Expect = 2e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486
|| || || ||||| || || |||||||| || || ||| | |||| ||| | ||
Sbjct 2556 CTGACTGGGAAGACAATAACGCTTGAGGTCGAATCGTCTGACACAATTGATAATGTAAAA 2497
Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546
|| || ||||| |||||||| || ||||| || ||||| || || |||| ||||| |||
Sbjct 2496 GCCAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAACGATTAATCTTTGCCGGT 2437
Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606
|||||||| || || | ||| ||||| ||||| || || |||| ||||||||||| |
Sbjct 2436 AAGCAACTTGAAGACGGTCGCACCCTCGCAGATTACAACATCCAGAAGGAATCCACCTTG 2377
Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| ||||||||||| ||||| ||
Sbjct 2376 CATCTCGTCTTGCGTCTGCGCGGAGG 2351
Score = 141 bits (156), Expect = 1e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 27426 GCTT-ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGA 27484
|||| || || |||||||| ||| | ||||||||||| || | ||| | ||| | |
Sbjct 3417 GCTTGACTGGAAAGACTATCACTTTGGAGGTTGAGTCTTCCGACACCATCGACAATGTCA 3358
Query 27485 AGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTG 27544
||||||| || || ||||| || || |||||||| |||||||| || |||||||| ||||
Sbjct 3357 AGGCTAAGATCCAAGACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTG 3298
Query 27545 GTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTC 27604
| |||||||||||||||| || ||| |||| || || || | || |||||||| ||
Sbjct 3297 GAAAGCAACTCGAGGATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGACCT 3238
Query 27605 TTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || | || | || |||||
Sbjct 3237 TGCATCTGGTACTACGCTTGCGAGGTGG 3210
Score = 129 bits (142), Expect = 7e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||| |||||||| || ||||| |||||||| || | ||| | || | || ||
Sbjct 2265 ACCGGGAAGACTATCACCCTTGAAGTTGAGTCCTCCGACACCATCGATAACGTTAAAGCC 2206
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||| ||||| ||||| |||||||| || || || || || |||||||| |||||
Sbjct 2205 AAGATTCAAGACAAAGAGGGCATTCCTCCGGATCAACAACGGCTCATTTTTGCGGGTAAA 2146
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| | || |||| ||| || || || || ||||| | || || ||||| |||||||||
Sbjct 2145 CAGTTGGAAGATGGTCGAACTCTTGCTGATTATAACATTCAGAAAGAATCTACTCTTCAT 2086
Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633
|| ||| | | ||||| || |||
Sbjct 2085 CTCGTCCTCAGACTTCGTGGAGGA 2062
>seq195
Length=27450
Score = 145 bits (160), Expect = 9e-30
Identities = 207/290 (71%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784
||||| || || ||||| || ||| | ||||||||||| | | |||||||| | |||
Sbjct 5073 TCAGCTAGCCCTTGAACCCCAATGCCAATCGGGCGGTGTCTCATGTTCGATTTTTTTGCC 5132
Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844
||||| | ||||||| | || |||| |||| ||||| ||| | ||||| ||
Sbjct 5133 TCCGGCACTGGGTAATAATTTATATCAATGATTTTGTTCAAATTGTGGGTAACTTCCTTG 5192
Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCAC---AAATGCCGGAAGG 80901
||||||||||| ||||| || |||||| | ||| || | ||| | ||| ||| |||
Sbjct 5193 GTAACATCATGGAGTTTTTGGAAGTCG---TAGTTTCCATCCACGATATATGTCGGTAGG 5249
Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCC 80961
| || |||| || || || ||||| || |||| | | | |||||| ||||||
Sbjct 5250 GCAATAGATGCCAAGTTACAAACTGCCACTTCATCAGGCGCAGAATACTCGATAATTTCC 5309
Query 80962 GTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011
||||| | ||| || || || || || || |||||||||||||| || ||
Sbjct 5310 GTGCAAAGATTGGAGGATTTGATAGTTCCAAGGTTTTTCTGGTTCGATTT 5359
>seq16992
Length=3647
Score = 86.0 bits (94), Expect = 7e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 27413 TCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCA 27472
||||| || | | || || || |||||||| || ||||| || || ||| ||| | |
Sbjct 2123 TCTTTATCCACAGCCTCACGGGTAAGACTATCACCCTTGACGTCGAAGCAGCTGACACAA 2182
Query 27473 TTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTC 27532
| | ||| | ||||| ||||||||||||||||| || || || ||||||||||| ||
Sbjct 2183 TCGACAATGTCAAGGCAAAAATTCAGGACAAGGAAGGCATCCCGCCAGACCAGCAACGAT 2242
Query 27533 TAATTTTTGC 27542
| |||| |||
Sbjct 2243 TGATTTGTGC 2252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569884542095440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |