Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7505 89.7 4e-13 >seq7505 Length=7180 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| |||| || || ||||| ||||| |||||||| || ||| | || Sbjct 2484 GACAAGGAAGGTATTCCACCTGACCAACAACGATTAATCTTTGCCGGTAAGCAACTTGAA 2425 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||| | | | |||||||||||||| || || ||| |||||| | || ||| Sbjct 2424 GACGGTCGCACCCTCGCAGATTACAACATCCAGAAGGAATCCACCTTGCATCTCGTCTTG 2365 Query 28003 CGTTTGCGTGGCGG 28016 ||| |||| || || Sbjct 2364 CGTCTGCGCGGAGG 2351 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| |||| ||| ||||||||| ||||||| || ||||| ||| | || Sbjct 3343 GACAAAGAAGGCATTCCTCCGGACCAGCAACGGCTAATTTTCGCTGGAAAGCAACTCGAG 3284 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| ||| | ||||||||||| || || || || |||||| |||| | Sbjct 3283 GATGGCCGCACCTTAGCGGATTACAACATTCAGAAGGAATCGACCTTGCATCTGGTACTA 3224 Query 28003 CGTTTGCGTGGCGG 28016 || ||||| || || Sbjct 3223 CGCTTGCGAGGTGG 3210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355603316270199