Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7505 165 2e-35 >seq7505 Length=7180 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||||||||| ||||| || |||||||| || ||||| || ||||||||||| ||||| Sbjct 2065 TCCACGAAGTCTGAGGACGAGATGAAGAGTAGATTCTTTCTGAATGTTATAATCAGCAAG 2124 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | |||||||||| ||| || || || || || || |||||||| || ||||||| Sbjct 2125 AGTTCGACCATCTTCCAACTGTTTACCCGCAAAAATGAGCCGTTGTTGATCCGGAGGAAT 2184 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || || ||||| || ||||| ||| ||||| ||||||||||| ||| ||||| || Sbjct 2185 GCCCTCTTTGTCTTGAATCTTGGCTTTAACGTTATCGATGGTGTCGGAGGACTCAACTTC 2244 Query 211070 GAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||| || || Sbjct 2245 AAGGGTGATAGTCTTCCCGGT 2265 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | | ||| ||||| | ||| ||||| ||||||||||| || || |||||||| Sbjct 3504 CGAAGACGCAAGACGAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTA 3563 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||| || || ||||| || || ||||| | |||||| ||||||||||| | ||| Sbjct 3564 CGTCCATCCTCAAGTTGCTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATACCT 3623 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| || ||||| |||||||| || |||||||| || || || || || Sbjct 3624 TCCTTGTCTTGAATCTTGGCCTTCACGTTATCAATGGTGTCTGATGACTCGACTTCAAGG 3683 Query 211074 GTGATCGTCTTTCCCGT 211090 ||||| ||||| || || Sbjct 3684 GTGATTGTCTTCCCAGT 3700 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || ||||| |||||||| ||||| ||||| || || || || | ||||| Sbjct 2654 AGTACAAGATGCAGAGTAGACTCTTTCTGGATATTATAGTCAGCGAGAGTACGCCCATCC 2713 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||| || | |||||||| || || || | |||||||| || Sbjct 2714 TCAAGTTGCTTGCCAGCGAAAATCAACCGTTGTTGATCTGGTGGGATGCCTTCCTTATCT 2773 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| ||| ||| ||||| | ||| || ||| Sbjct 2774 TGAATCTTGGCCTTTACGTTATCGATGGTGTCGGAGGATTCTACCTCCAAAGTAATGGTC 2833 Query 211083 TTTCCCGT 211090 ||||| || Sbjct 2834 TTTCCAGT 2841 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || || | ||||| || || |||||||| ||||| || ||||| | || ||||| Sbjct 2368 GACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCTGCGAGGGTGCGACCGTCTTC 2427 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || || ||||| | |||||||||||||| |||| ||||||||||| || Sbjct 2428 AAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTG 2487 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||| || || || || |||||||| ||| ||||| || || || ||||| Sbjct 2488 AATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCGACCTCAAGCGTTATTGTCTT 2547 Query 211085 TCCCGTGAGA 211094 || || ||| Sbjct 2548 CCCAGTCAGA 2557 Score = 129 bits (142), Expect = 1e-24 Identities = 142/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 210902 TAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATC 210961 ||| || || || | || || || || || ||||| |||||||| | ||| | ||||| Sbjct 3224 TAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGCTAAGGTGCGGCCATC 3283 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || || ||||| || ||||| || || ||||| ||||| ||||||| ||||| ||||| Sbjct 3284 CTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGGAATGCCTTCTTTGTC 3343 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||||| || || || ||||||||||| || |||||||| | |||||| || Sbjct 3344 TTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCCAAAGTGATAGT 3403 Query 211082 CTTTCCCGT 211090 |||||| || Sbjct 3404 CTTTCCAGT 3412 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || || || | ||| || || ||||| ||||| ||||| || || Sbjct 2926 TCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCTAG 2985 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | |||||||| || || || || || ||||| | || || || || || |||| Sbjct 2986 GGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAAT 3045 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||||| ||||||||| || || || || || || || ||| ||||||||| Sbjct 3046 ACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACCTC 3105 Query 211070 GAGAGTGATCGTCTTTCCCGT 211090 ||| || || ||||| || || Sbjct 3106 GAGTGTAATAGTCTTGCCGGT 3126 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || || |||||||| ||||||||||| ||||||||||| || | Sbjct 1769 TCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCCAA 1828 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| || || || || || ||||| || || || || || ||||| || | Sbjct 1829 TGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGGAT 1888 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || || |||||||| || || ||||| || || || |||||||| ||| || || Sbjct 1889 GCCCTCTTTGTCCTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACTTC 1948 Query 211070 GAGAGTGATCGTCTTTCCCGT 211090 | ||| || || || || || Sbjct 1949 CAAAGTAATGGTTTTACCGGT 1969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158264807880005