Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq7505 86.0 5e-12 >seq7505 Length=7180 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/163 (72%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 39038 GTAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTT 39097 |||| | |||||| ||| ||||| | | || | || | ||| || || ||||| Sbjct 1749 GTAATTTCAATTTA--CAATCCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTT 1806 Query 39098 TTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAA 39157 |||| || |||||||| || | |||||| | || ||||| ||||| || || || || | Sbjct 1807 TTTGAATGTTATAATCTGCCAATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGA 1866 Query 39158 GACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 |||||||||| || | || | || |||||||||| ||| ||| Sbjct 1867 GACGCTGCTGATCAGGCGGGATGCCCTCTTTGTCC-TGAATTT 1908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429232871607881