Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq12400 87.8 2e-12 >seq12400 Length=4870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/222 (69%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 ||| ||||| |||||||| || | ||||| | | ||||||||| | ||||| || Sbjct 1971 AATTTGAAAGCCGTAAAAACAACGTGCTTCCGCAATTTGAACTTCTCCGCTGAATCTCTC 2030 Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 | || || || || || || || || ||| || || || || | |||||| || Sbjct 2031 AATTAGATTCTCATTGACGATGCCATCTGAGGCAGCGAAGAATGCAAGAACATGCTTAAT 2090 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTT---CCAGTGGGGCAAATCTTTAGTTAAATC 5047 || | | ||||| | || |||||||| ||| | | ||| ||||||| || ||| Sbjct 2091 GAAATGTTTCTCGTCCGCATTTAGTTTTTTGTCCCAATCGTGCATGTCTTTAGATAGATC 2150 Query 5048 AACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 || |||||| | ||||||||||| ||||| || |||||| Sbjct 2151 AATTTCTTCCGCCGTCCAAAACGAAGCTTCGGCGCGTTTGTA 2192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426738688807421