Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq7505 168 1e-36 seq16992 87.8 4e-12 >seq7505 Length=7180 Score = 168 bits (186), Expect = 1e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || ||||| || | || ||||| || ||| ||| || ||||||||||| || || Sbjct 2350 ACCTCCGCGCAGACGCAAGACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTAATCTGC 2409 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || ||||| || ||||||||||| || |||||||||||| || Sbjct 2410 GAGGGTGCGACCGTCTTCAAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTCAGGTGG 2469 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||| ||||| |||||||| |||| || ||||| || | |||||| Sbjct 2470 AATACCTTCCTTGTCTTGAATCTTGGCTTTTACATTATCAATTGTGTCAGACGATTCGAC 2529 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || || || || ||||| || |||| Sbjct 2530 CTCAAGCGTTATTGTCTTCCCAGTCA 2555 Score = 163 bits (180), Expect = 6e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || | || || || || || || ||||||||||||||||| || Sbjct 3497 ACCACCGCGAAGACGCAAGACGAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCTGC 3556 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| ||||| || || ||||||||||| ||||| |||||| || Sbjct 3557 AAGGGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGG 3616 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| ||||| || || ||| |||| || ||||| || | ||||| Sbjct 3617 GATACCTTCCTTGTCTTGAATCTTGGCCTTCACGTTATCAATGGTGTCTGATGACTCGAC 3676 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||| || ||||| ||||| || || ||| Sbjct 3677 TTCAAGGGTGATTGTCTTCCCAGTTAAA 3704 Score = 159 bits (176), Expect = 7e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || ||||| || || ||| ||||| |||||||| ||||| Sbjct 2924 CCTCCACGTAGACGGAGCACGAGATGCAAAGTAGATTCCTTTTGAATGTTGTAATCAGCT 2983 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| ||||||||||| || ||||||||||| || || || || ||| Sbjct 2984 AGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 3043 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||||||||||||||| || || |||| || || || || | ||| || Sbjct 3044 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTATCAATCGTATCGGAGGATTCAACC 3103 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAA 283078 ||||| || || ||||| || || || Sbjct 3104 TCGAGTGTAATAGTCTTGCCGGTTAA 3129 Score = 152 bits (168), Expect = 1e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || ||||| ||||| | || ||||| ||||| || |||||||| Sbjct 2638 ACCACCACGCAGACGGAGTACAAGATGCAGAGTAGACTCTTTCTGGATATTATAGTCAGC 2697 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| ||||| || || || || ||||| |||||||| || || Sbjct 2698 GAGAGTACGCCCATCCTCAAGTTGCTTGCCAGCGAAAATCAACCGTTGTTGATCTGGTGG 2757 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| ||||| ||||| || |||||| ||||||| ||||| || | ||| || Sbjct 2758 GATGCCTTCCTTATCTTGAATCTTGGCCTTTACGTTATCGATGGTGTCGGAGGATTCTAC 2817 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAA 283078 || | ||| || ||||| || ||||| Sbjct 2818 CTCCAAAGTAATGGTCTTTCCAGTCAA 2844 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||| ||| ||||||||||| || || ||| || || |||||||| || || Sbjct 3209 ACCACCTCGCAAGCGTAGTACCAGATGCAAGGTCGATTCCTTCTGAATGTTGTAATCCGC 3268 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| ||||| || || || || || | ||||| ||||| || Sbjct 3269 TAAGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAAATTAGCCGTTGCTGGTCCGGAGG 3328 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || |||||||||||||| || || || | ||||| ||||| |||| || || Sbjct 3329 AATGCCTTCTTTGTCTTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 3388 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAA 283078 || | |||||| ||||| || ||||| Sbjct 3389 CTCCAAAGTGATAGTCTTTCCAGTCAA 3415 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || ||||| | || |||||||| ||||| || || || Sbjct 1767 CCTCCACGGAGACGGAGAACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGCC 1826 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || ||||||||||| |||||||| || || || || | ||| || || ||| ||| Sbjct 1827 AATGTTCGGCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGCTGCTGATCAGGCGGG 1886 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||| || || || || || || | || || ||||| || | ||| ||| Sbjct 1887 ATGCCCTCTTTGTCCTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGACGATTCCACT 1946 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAA 283078 || | ||| || || ||||| ||||| Sbjct 1947 TCCAAAGTAATGGTTTTACCGGTCAA 1972 Score = 93.3 bits (102), Expect = 9e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 |||| | || |||||||| ||||||||||| |||||||||||||| ||||| || Sbjct 3948 AGATAAGTCGCTGTTGGTCTGGAGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACAT 4007 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||||| |||||||||| ||| ||||| | ||||| || || || || Sbjct 4008 TATCGATCGTGTCCGAAGATTCAACTTCTAAGGTGATAGTTTTGCCGGT 4056 >seq16992 Length=3647 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 ||| | ||||| ||||| ||||| ||| || || |||||||| || || ||||| || Sbjct 2252 GCACAAATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGAATTTTTGCCTTG 2193 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || | ||||| ||||| | |||||||| || || ||||| ||||||||||| Sbjct 2192 ACATTGTCGATTGTGTCAGCTGCTTCGACGTCAAGGGTGATAGTCTTACCCGT 2140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045938046423998