Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7505 95.1 9e-15 >seq7505 Length=7180 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | ||| || || || | ||| ||||| ||||||||||| Sbjct 2344 TTGCATACCTCCGCGCAGACGCAAGACGAGATGCAAGGTGGATTCCTTCTGGATGTTGTA 2403 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| ||||| ||| |||| || || ||||| ||||||||||| || || || || || Sbjct 2404 ATCTGCGAGGGTGCGACCGTCTTCAAGTTGCTTACCGGCAAAGATTAATCGTTGTTGGTC 2463 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 | || | ||||||||| || ||||| |||| | || | || ||||| | | Sbjct 2464 AGGTGGAATACCTTCCTTGTCTTGAATCTT-GGCTTTTACATTATCAATTGTGTCAGACG 2522 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 |||| ||||| | ||| || ||||| || || || Sbjct 2523 ATTCGACCTCAAGCGTTATTGTCTTCCCAGTCAG 2556 Score = 95.1 bits (104), Expect = 9e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| ||||||||||| || || || | || || || || || || |||||| Sbjct 2960 TCCTTTTGAATGTTGTAATCAGCTAGGGTACGGCCATCTTCTAGTTGTTTACCAGCAAAG 3019 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| ||||||||||||| || | ||||||||| || ||||| ||| | | Sbjct 3020 ATCAATCGCTGCTGATCTGGTGGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTA 3079 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 | || || |||| |||||| ||||| | ||||| ||||| || || Sbjct 3080 TCAATCGTATCGGAGGATTCAACCTCGAGTGTAATAGTCTTGCCGGT 3126 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| || ||||| | || |||||||||||||||||| || Sbjct 3494 CATACCACCGCGAAGACGCAAGACGAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTC 3553 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || | || || || ||||| || ||||||||||| || ||||| || | Sbjct 3554 TGCAAGGGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATCAAGCGTTGCTGGTCAGG 3613 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||||||| || ||||| ||||| | | |||||||| | || || Sbjct 3614 AGGGATACCTTCCTTGTCTTGAATCTTGGCCTTCACGTTATCAATGGTGTCTGATGACTC 3673 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGT 44313 || || | || || ||||| || || Sbjct 3674 GACTTCAAGGGTGATTGTCTTCCCAGT 3700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359728310901729