Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq3790 123 3e-23 seq1300 89.7 7e-13 >seq3790 Length=10706 Score = 123 bits (136), Expect = 3e-23 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 155871 TTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAAC 155930 ||||||||||| | ||| ||||||||||| |||||| ||||| || | | ||| || Sbjct 9334 TTTAAAATTTGTAAACGACCCTTTTCATCAGGTAATGAGATTTCCATATGAACTTCTAAT 9275 Query 155931 CGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATT 155990 || || ||||||| ||| ||||| ||||| | || || || ||||| || || ||| Sbjct 9274 CGACCTGGTCTTAGTAAAGCTTCATCAATCATATCTAATCGATTAGTCATTCCAATAATT 9215 Query 155991 AAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 ||||| || ||||| || || || || |||||||| |||||||||||||| || Sbjct 9214 AAAATATTATTTAATTGATCCACTCCATCCATTTTAGATAATAATTGATTGACCAC 9159 >seq1300 Length=16371 Score = 89.7 bits (98), Expect = 7e-13 Identities = 118/159 (74%), Gaps = 5/159 (3%) Strand=Plus/Plus Query 63720 TAAAA--TAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 ||||| || ||||| ||||| | |||||||||| ||| ||||||||||| || | Sbjct 14933 TAAAAGTTAGAATTA-GATCTACACGTATACCAGAAACAGGAGATAAATTTGCATC-TAG 14990 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||| || |||||| ||||| |||||||||||||||| ||||| Sbjct 14991 ACATGGACAAAAAGGAACTGTTGGTATACTTTATAGACAAGAAGATATGCCATTTACATC 15050 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGC 63875 ||| || || || ||| | | ||||||||||| || Sbjct 15051 AGAAGGAATATGTCCAGATGTAATAATCAATCCACATGC 15089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666577086609720