Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq23 105 7e-18 >seq23 Length=283388 Score = 105 bits (116), Expect = 7e-18 Identities = 282/431 (65%), Gaps = 0/431 (0%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || || || |||||| || | |||||||| | ||| || ||||| || || || Sbjct 279570 AGGCAGGCAAAATCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTG 279511 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | |||||||| || || ||||| | ||| || |||| ||| || || || || ||| Sbjct 279510 AGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGAGGCAAAGGAGCCTGAGAAG 279451 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||| ||||||| ||||| || | | || || ||| | || || | || Sbjct 279450 AAGATACCTTCGACGGCGGCAAAGGCAACGAGACGCTCAGCGAAGGTGGCCTTGCGGTCG 279391 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 |||||| | |||| ||||| || | ||| | | || || || | ||| Sbjct 279390 TTGATCCATCGAAGGGCCCATTCGGCCTTCTTCTTGACGACGGGGATAGTCTCGACGGCG 279331 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 | ||| | ||| | || | ||| || || || |||||||| || ||| Sbjct 279330 TCAAAGAGAAACTCGCGCTGCTCGGGCTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAG 279271 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 |||||||||| ||||||||||| ||||| || ||||| |||||||||||||| || Sbjct 279270 GTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGGGCTTCGGCG 279211 Query 17321 ATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCG 17380 || || || ||| || || | || || ||||| ||||| ||||| ||| Sbjct 279210 GCCTGGACCTCGGAACTGAAGCGCTCGACGAGGTTCTCGTTGACGATACCGTCAGAAGCG 279151 Query 17381 GCGAAAAACGC 17391 ||||| || || Sbjct 279150 GCGAAGAAGGC 279140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545444736320