Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=755036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || ||||| |||| || ||||||||||| || Sbjct 175160 ATGCAGATTTTCGTCAAGACGTTGACAGGAAAGACGATCACTCTCGAAGTCGAGTCCTCG 175101 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 175100 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAG 175041 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || ||||||||||| || | | | | | ||| || ||| Sbjct 175040 CAGCGATTGATCTTTGCTGGTAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAAC 174981 Query 24171 ATTCAAAAAGA 24181 ||||| || || Sbjct 174980 ATTCAGAAGGA 174970 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || ||||| |||| || ||||||||||| || Sbjct 175388 ATGCAGATTTTCGTCAAGACGTTGACAGGAAAGACGATCACTCTCGAAGTCGAGTCCTCG 175329 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 175328 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAG 175269 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || ||||||||||| || | | | | | ||| || ||| Sbjct 175268 CAGCGATTGATCTTTGCTGGTAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAAC 175209 Query 24171 ATTCAAAAAGA 24181 ||||| || || Sbjct 175208 ATTCAGAAGGA 175198 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || ||||| |||| || ||||||||||| || Sbjct 175616 ATGCAGATTTTCGTCAAGACGTTGACAGGAAAGACGATCACTCTCGAAGTCGAGTCCTCG 175557 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 175556 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAG 175497 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || ||||||||||| || | | | | | ||| || ||| Sbjct 175496 CAGCGATTGATCTTTGCTGGTAAGCAACTCGAGGACGGCCGCACTCTTTCCGACTACAAC 175437 Query 24171 ATTCAAAAAGA 24181 ||||| || || Sbjct 175436 ATTCAGAAGGA 175426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935874243720