Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 >seq2 Length=2105630 Score = 100 bits (110), Expect = 3e-16 Identities = 260/388 (67%), Gaps = 10/388 (3%) Strand=Plus/Minus Query 20363 AATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAG-TCCGCCGGGTTCCA 20421 || || || |||| ||| || || || || ||||| | | |||| || |||||||| Sbjct 325710 AACTGGCAGAACATGTGGCAAGGAGGGAGAGCCATGAGAG-CAAGATCTTTGGGGTTCCA 325652 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGT-ACG 20480 |||| | | ||| || | |||| || || || || || || | | | ||| Sbjct 325651 TGCACTGAGCAAGATCCTGCGATCGGTGGGGTTGTTCTTGATCTTGTCAATGACTTCACG 325592 Query 20481 ACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAA 20540 ||||||||||| || || || || ||||| | || |||| ||| | || |||| Sbjct 325591 -CAATTGGTCAACGCCTTGACCGGTGTAGTCGGTGTCGCAGTCCTTGTATTCTGCGCCAA 325533 Query 20541 AGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGC 20600 |||| | ||| ||||| ||||| || || |||||||| || || | | ||| || | Sbjct 325532 AGTGTCGCCATTGGAAGCCGTAGACTGGACCCAAATCACCTTCTCGCCGGTGTTGCAAGT 325473 Query 20601 CGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC--TGTTCT 20658 | || | | |||||||| | || || || |||||| || | || || ||| Sbjct 325472 CACGTGAGTCGAGGAACTCTCGCGATCCGTTACCGTCCCAGATGTGCACGCCCTTGTCAG 325413 Query 20659 TGA-AAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGC 20717 | | ||||| ||||||| || | || || |||||| || ||||| | || ||||| Sbjct 325412 TAAGAAGCT---TGGAGTCGGTCTTGCCAGCCACAAACCAGAGGAGCTCCTCCAGTACGC 325356 Query 20718 CTCGCCAAAACACCCGCTTTGTGGTTAG 20745 ||||| | || || ||||||||||| || Sbjct 325355 CTCGCAAGAAGACACGCTTTGTGGTGAG 325328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372667588160