Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 6e-13 >seq14 Length=672989 Score = 91.5 bits (100), Expect = 6e-13 Identities = 190/282 (67%), Gaps = 11/282 (4%) Strand=Plus/Plus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 ||||| || | ||||| |||||||| ||||| || | || || || || || || ||| Sbjct 434400 GATGCCGTCGTCACTGTCCCCGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGAT 434459 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || || ||| | ||| | || ||| | || ||||||||||| ||||| || || || Sbjct 434460 GCCGGTATCATTTCGGGTCTCAACGTTATGCGTATTATTAATGAGCCTACTGCTGCCGCC 434519 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAA-ACAGAA---GaaaaaaaTATTTTAGTATT 451494 | || || || || | | ||||| || ||| || || || || | | || Sbjct 434520 ATCGCTTACGGTCTCG-------ACAAGAAGACCGAAGGTGAGAAGAACGTTCTCATCTT 434572 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| | || ||||| || ||| ||| | ||| ||||||| || || | || || Sbjct 434573 CGATCTCGGAGGAGGTACCTTCGATGTTTCGCTCCTTACAATTGAGGAGGGTATCTTCGA 434632 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || ||||| ||| |||||| ||||| || || ||||| || Sbjct 434633 GGTCAAGGCCACCGCTGGTGACACTCACCTTGGTGGTGAGGA 434674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717792466592