Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq11 109 4e-19 >seq11 Length=671998 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||||||||| || || || || || |||||||| | || || | | |||| || Sbjct 438660 AACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTACGGCCATCCTC 438719 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || || || || | |||||| ||||| || ||||||||||| || || || Sbjct 438720 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTG 438779 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| | || | ||||| || | || || || || |||| || || Sbjct 438780 GATCTTAGCCTTGACATTGTCAATGGTGTCCGAAGGCTCGACCTCGAGGGTGATGGTCTT 438839 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| | || || ||||| |||||||| Sbjct 438840 GCCGGTGAGGGTCTTGACAAAGATCTGCAT 438869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || ||||| || | || | |||| || | ||| Sbjct 360131 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCAAAAGGGTGCGACCATCTTCGAGCTGC 360072 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| || | |||||| ||||| || ||||| ||||| || || || || || Sbjct 360071 TTACCAGCAAAGATGAGACGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGGATCTTG 360012 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | || || || || |||| ||| || || || Sbjct 360011 GCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTACCCGTG 359952 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 359951 AGGGTTTTAACAAAGATCTGCAT 359929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278284088568