Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12 96.9 4e-15 >seq12 Length=654828 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 138174 TGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAAT 138233 |||| || |||| ||||| || || || || ||||||||||| ||||| || |||| Sbjct 223882 TGTTCAGCGACACAGATAGGGCCCACACCGGGTCCTCCACCTCCGTGTGGGATGGAGAAA 223823 Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCA-CCATAGTCACATGGTTTTGCTAGACC 138292 ||||| || || || ||||| ||||| ||| |||| | | ||| || | || | Sbjct 223822 GTCTTGTGCAAGTTGAGATGTGTCACATCGGCACCCATGATGGC-TGGGTTGGTGAGTGC 223764 Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 ||||| || | || || ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 223763 CACCTGAGCCTGAAGGTTGGCACCGTCGAGGTAGACCTGTCCACCGTTGTCGTGGACGAT 223704 Query 138353 CT 138354 || Sbjct 223703 CT 223702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998226300480