Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 1e-13 >seq23 Length=283388 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| ||||| |||| | || ||||| ||||| || ||||| Sbjct 279188 GCTCGACGAGGTTCTCGTTGACGATACCGTCAGAAGCGGCGAAGAAGGCAAGGACGTGAG 279129 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| || || |||||||| || || |||| |||||| | || ||||||||| | Sbjct 279128 AGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGAAGGTCCTTGGAGA 279069 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||| || ||| | ||||| || | | |||||||||||| ||||| |||| Sbjct 279068 GGTCGATTTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCC--AGAT 279011 Query 110892 CT 110893 || Sbjct 279010 CT 279009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094266471680