Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 6e-13 >seq54 Length=31557 Score = 91.5 bits (100), Expect = 6e-13 Identities = 190/282 (67%), Gaps = 11/282 (4%) Strand=Plus/Plus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 ||||| || | ||||| |||||||| ||||| || | || || || || || || ||| Sbjct 11925 GATGCCGTCGTCACTGTCCCCGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGAT 11984 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || || ||| | ||| | || ||| | || ||||||||||| ||||| || || || Sbjct 11985 GCCGGTATCATTTCGGGTCTCAACGTTATGCGTATTATTAATGAGCCTACTGCTGCCGCC 12044 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAA-ACAGAA---GaaaaaaaTATTTTAGTATT 451494 | || || || || | | ||||| || ||| || || || || | | || Sbjct 12045 ATCGCTTACGGTCTCG-------ACAAGAAGACCGAAGGTGAGAAGAACGTTCTCATCTT 12097 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| | || ||||| || ||| ||| | ||| ||||||| || || | || || Sbjct 12098 CGATCTCGGAGGAGGTACCTTCGATGTTTCGCTCCTTACAATTGAGGAGGGTATCTTCGA 12157 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || ||||| ||| |||||| ||||| || || ||||| || Sbjct 12158 GGTCAAGGCCACCGCTGGTGACACTCACCTTGGTGGTGAGGA 12199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975653950830968