Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1042 87.8 2e-12 >seq1042 Length=313568 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 104989 AGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATAT 105048 |||||||||||| || ||| | || || || |||||| |||| ||| || |||| | Sbjct 42514 AGAAGGTGATTTGGGTCCAGTCTACGGCTTCCAATGGCGACACTTTGGCGCAGAATACAA 42455 Query 105049 CGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAAC 105108 ||||| || |||||||| ||||| ||||| | |||||||| || |||| || || | Sbjct 42454 GGACTGCGACACCGACTACACCGGTCAAGGCGTTGACCAATTGCGTGAAGTCATTGACAA 42395 Query 105109 TATAAAAAATAACCCC 105124 || || || |||||| Sbjct 42394 GATCAAGAACAACCCC 42379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658382246318160