Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq54 556 2e-153 seq998 217 2e-51 seq1013 170 3e-37 seq1042 161 1e-34 seq1379 141 1e-28 seq2517 125 9e-24 seq1240 96.9 5e-15 seq1493 87.8 2e-12 >seq54 Length=31557 Score = 556 bits (616), Expect = 2e-153 Identities = 1057/1551 (68%), Gaps = 9/1551 (1%) Strand=Plus/Plus Query 195286 CATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATG 195345 ||| ||| | | || || ||||||||| | || ||||| ||||| ||||||| || || Sbjct 11507 CATCATGACCAAGGCCATCGGTATCGATCTCGGTACTACCTACTCCTGTGTTGCCGTCTG 11566 Query 195346 GCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTA 195405 ||| ||||| ||||| ||| | || | || ||||| || ||||| || || || || || Sbjct 11567 GCAGAATGACCGTGTCGAGGTCATTGCCAACGACCAGGGTAACCGCACTACCCCCTCATA 11626 Query 195406 CGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTAT 195465 ||| ||||| || || ||||||||| | ||||||||||| || || ||| ||||| Sbjct 11627 CGTCGCCTTCACCGACTCGGAACGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCTAT 11686 Query 195466 GAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA 195525 |||||| ||| || ||||| || || |||||||||||||| ||||||||| ||| Sbjct 11687 GAACCCCCACAACACCGTCTTCGATGCCAAGCGTCTTATTGGCCGCAAGTTTGACGATGC 11746 Query 195526 GAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTT--CCCGGTGTGGCTGAT 195583 | || || || || ||| ||||| ||| || ||||| | | | | ||| Sbjct 11747 CGAGGTTCAGTCTGACATGAAGCACTGGCCTTTCGAGGTTGTCAACACCG-GCGGC---- 11801 Query 195584 AAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATT 195643 ||||| ||| | || | | ||||||||||| || ||||||||||| | Sbjct 11802 AAGCCCCAGATCCGCATCGAGTACAAGGGTGAGAAGAAGGTCTTCACTCCCGAAGAAGTC 11861 Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTG 195703 || || ||||| | | |||||| ||||| || || | | | | ||| ||| || Sbjct 11862 TCCTCCATGGTTCTCCTCAAGATGCGTGAGACCGCCGAGGCCTACCTCGGTGGAACCGTC 11921 Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763 || ||||| || || ||||| || |||||||||| || || || || ||||| || ||| Sbjct 11922 AAGGATGCCGTCGTCACTGTCCCCGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAG 11981 Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCT 195823 || || | | ||| ||||||| ||| | | | ||||| ||||| || || || || Sbjct 11982 GATGCCGGTATCATTTCGGGTCTCAACGTTATGCGTATTATTAATGAGCCTACTGCTGCC 12041 Query 195824 GCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGAT 195883 || || ||||| ||||| |||||||| | || | || || || || | ||||| ||| Sbjct 12042 GCCATCGCTTACGGTCTCGACAAGAAGACCGAAGGTGAGAAGAACGTTCTCATCTTCGAT 12101 Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943 ||||| || ||||| || ||||| || || || | ||||| | ||||| ||||| || Sbjct 12102 CTCGGAGGAGGTACCTTCGATGTTTCGCTCCTTACAATTGAGGAGGGTATCTTCGAGGTC 12161 Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT 196003 ||||| || |||||||| ||||| || |||||||| || ||||| ||||| || Sbjct 12162 AAGGCCACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTCGACAACCGTCTCGTCAAC 12221 Query 196004 CA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGC 196062 || || ||| | |||||| || ||||| ||||| || | | || || | || Sbjct 12222 CACTTCGTC-CAGGAGTTCAAGCGCAAGAACAAGAAGGACTTGACCACCAACGCTCGTGC 12280 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 |||||| || || | || |||||||| ||||| || || |||||||| || | || || Sbjct 12281 TCTTCGACGTCTCCGCACCGCATGTGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCCCA 12340 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCG 196182 || | | ||||| || ||| | || || || || |||||||| || | || ||||| Sbjct 12341 GACCACCATCGAGATCGACTCGCTCTTCGAGGGTATCGACTTCTACACTTCCATCACCCG 12400 Query 196183 TGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACA 196242 ||| ||||| || ||| | | ||| | || | | || || || || || | Sbjct 12401 TGCCCGTTTCGAGGAGCTCTGCGGTGACCTCTTCTCGCACACCATCGAGCCCGTCGAGAA 12460 Query 196243 AGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGG 196302 || || |||||| | ||||| || ||| | || | || |||||||| || || || Sbjct 12461 GGTTCTCCGTGACTCCAAGATTGACAAGGGTTCCGTCCACGAGATTGTCCTCGTCGGTGG 12520 Query 196303 ATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTT 196362 || || ||||| || ||| | || || | || | ||||||||| | || | Sbjct 12521 TTCCACTCGTATCCCCAAGGTCCAGAAGCTCCTCACCGACTTCTTCAACGGTCGTGAGCT 12580 Query 196363 AAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTAT 196422 ||||| |||||||||| ||||| || ||||| |||||||| ||||| ||||| || || Sbjct 12581 CAACAAGTCGATCAACCCCGATGAGGCCGTTGCCTATGGTGCCGCCGTCCAGGCCGCCAT 12640 Query 196423 TCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGT 196482 ||| || |||| | | || ||| || || || || || ||||| || || | Sbjct 12641 TCTTTCCGGTGACACCTCCGAGAAGACCCAGGACCTCCTCCTCCTCGATGTCGCTCCTCT 12700 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 ||| ||||| | || || || |||||||| | ||| | || | |||||||| || Sbjct 12701 CTCCATGGGTATCGAGACCGCCGGTGGTGTCTTCACTCCTCTCATCAAGAGGAACACCAC 12760 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602 | |||| || |||||| | |||| || || || | || || || || ||||| Sbjct 12761 TGTTCCCACCAAGAAGTCCGAGATCTTCTCTACCTACGCTGACAACCAGCCCGGTGTGTT 12820 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTT 196662 || || || | || || || || | || | ||||| ||| | | || || | || Sbjct 12821 GATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACTTGCTCGGCAAGTT 12880 Query 196663 CGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGA 196722 ||| | | || || || |||| || | |||||||| ||||| | || |||||| Sbjct 12881 CGAGCTCTCTGGTATCCCCCCTGCTCCTCGTGGTGTTCCTCAGATCGAGGTCACCTTCGA 12940 Query 196723 TATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGA 196782 | | ||||| || | ||||| || ||| | || | || |||| | | ||||| || || Sbjct 12941 TGTTGACGCCAACGCCATTCTTAATGTCTCTGCCGCTGAGAAGGGTACCGGCAAGTCCGA 13000 Query 196783 AAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGA 196833 ||||| || ||| |||||||| || |||||| |||| | || || Sbjct 13001 GAAGATCACCATCCGCAACGACAAGGGTCGTCTTTCTTCGGAGCAGATCGA 13051 >seq998 Length=480981 Score = 217 bits (240), Expect = 2e-51 Identities = 186/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| |||||||| || || || || |||||||||||||| ||||| || Sbjct 167887 ATGCAGATCTTTGTTAAAACCCTCACGGGTAAGACGATCACCCTCGAGGTCGAGTCTTCG 167828 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || |||||||| ||||| || |||||| Sbjct 167827 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAG 167768 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||||||||| ||||| |||||||| || ||||| || |||||| Sbjct 167767 CAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGCACCCTTTTGGACTACAAC 167708 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || ||||||||||| || ||||| || || | ||||| |||||||| Sbjct 167707 ATCCAGAAGGAGTCTACCCTTCACCTCGTCCTCCGCCTTCGTGGTGGTGC 167658 Score = 199 bits (220), Expect = 5e-46 Identities = 185/235 (79%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || | || || || || ||||| || ||||| |||| Sbjct 89109 GTGGTATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACTCTTGAGGTCGAGT 89168 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||||||| || ||||| || ||||| || | Sbjct 89169 CCTCTGACACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCTG 89228 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| || || || |||||||| || |||||||||||||| || |||||| | || | Sbjct 89229 ATCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACT 89288 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 ||||| | || |||||||| ||| | || ||||| || | ||||| |||||||| Sbjct 89289 ACAACATCCAGAAGGAGTCGACTTTGCATCTTGTCCTCCGTCTTCGTGGTGGTGC 89343 Score = 196 bits (216), Expect = 6e-45 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| || || || || |||||||||||||| ||| | || Sbjct 88886 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCTTCG 88945 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| || ||||| || || |||||||||||||| || |||||| Sbjct 88946 GACACCATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 89005 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||| || ||||| ||||||||| | ||||||||| Sbjct 89006 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCGGATTACAAC 89065 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| |||||||| || || || || ||||| | || || |||||| Sbjct 89066 ATTCAGAAGGAGTCCACCCTTCATCTCGTTCTCCGCCTCCGTGGTGGT 89113 >seq1013 Length=76640 Score = 170 bits (188), Expect = 3e-37 Identities = 454/688 (66%), Gaps = 13/688 (2%) Strand=Plus/Minus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 |||||||||||| | |||||||| ||||| |||||||||| | || | || || Sbjct 12418 ATTGGTATCGATCTCGGAACTACCTACTCGTGTGTTGGTGCTCAGGTCAACGGCCGCGTT 12359 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || ||| | || |||||||| ||||| | || || |||||||| ||||| || | Sbjct 12358 GAAATCATCACCAACGACCAAGGTAACCGAATCACCCCCTCGTACGTCGCCTTCAC---T 12302 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 || ||||| || ||||| ||||| || || || | || ||||| || || Sbjct 12301 CCCGAGCGTCTTGTCGGAGACGCCGCCAAGAACCAAGCCGCCCAAAACCCCGAAAACACC 12242 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGA-TAAGAAAGTC-CAAGACG 195539 |||||||||| |||||||| ||||||||||||| || | || || ||||| | Sbjct 12241 ATCTTTGACGCCAAGCGTCTCATTGGTCGCAAGTGGGGCGAGTCCGA---TCTCAAGAAG 12185 Query 195540 ATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATG 195599 ||| || | ||| | | | | | | || || ||| | | Sbjct 12184 GACGCCAGGCACCTTCCCTTCAAGCTCGTTGAGAAGAAG--GGCAAACCCGCCATTCAGG 12127 Query 195600 TTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGA 195659 || | ||||||| ||||| || |||| || || | || | ||||| | Sbjct 12126 TTACCGTCAACGGTGAAAAGAAGGTCTTCACTCCTGAGGAGGTCTCTGCCATGGTCCTTC 12067 Query 195660 TTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGA 195719 |||||||||||||| || || | | | | ||| | | || | | || ||||| | Sbjct 12066 AGAAGATGAAGGAGACCGCCGAGGCCTACCTTGGTCACAAGGTCACCCACGCCGTTGTCA 12007 Query 195720 CTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTG 195779 | || || |||||||||| || | || |||||||| || |||||||||| | | || | Sbjct 12006 CCGTCCCCGCTTACTTCAACGACGCTCAGCGACAGGCCACCAAGGACGCTGGTACCATCG 11947 Query 195780 CGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839 | || || ||| ||| | || | || || || || || || || || ||||| |||| Sbjct 11946 CCGGCCTCAACGTTCTCCGTATCGTTAACGAGCCTACCGCTGCCGCTATCGCTTACGGTC 11887 Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||||| ||||||| || | | | ||| ||||| ||||| ||||| | Sbjct 11886 TTGACAAG---AAGGACGGCGAGTCTCAGATCATCGTCTACGATCTTGGTGGAGGTACCT 11830 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | ||||| || || ||| ||||| |||| | ||||| || || || ||||||| Sbjct 11829 TCGATGTTTCGCTCCTCTCGATTGACTCTGGTGTCTTCGAGGTGCTTGCAACCGCTGGTG 11770 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | ||||| || |||||||| || ||||| Sbjct 11769 ACACTCACCTTGGTGGTGAGGACTTCGA 11742 >seq1042 Length=313568 Score = 161 bits (178), Expect = 1e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| ||||| || ||||| ||||| ||| |||| ||| Sbjct 114500 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGGCC 114559 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || || ||||| ||||| || || || ||||||||||| Sbjct 114560 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTTGCTGGTAAG 114619 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || |||||| | || |||| | | || |||||||| || || ||| Sbjct 114620 CAGCTCGAGGACGGCCGCACCCTCTCGGACTACAGCATCCAGAAGGAGTCCACCCTTCAC 114679 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| || | || || |||||| Sbjct 114680 CTTGTCCTCCGTCTCCGTGGTGGT 114703 >seq1379 Length=397549 Score = 141 bits (156), Expect = 1e-28 Identities = 337/492 (68%), Gaps = 23/492 (5%) Strand=Plus/Minus Query 198465 GGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAAAACCCCGAA 198524 ||||| ||| || ||||| ||| || |||| |||| | || || || || |||||| Sbjct 128822 GGTATGGACGAGGCCAAGGAAGAGATCATGGAGTTTGTCAACTTCCTCAAGAAGCCCGAA 128763 Query 198525 AAGTACTATGGAAGT--GGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGG 198582 |||||| | |||| || ||| || || |||||||| ||||| ||||| | || | Sbjct 128762 AAGTACAA--GAAGCTCGGCGCCAAGATTCCTCGTGGTGCCATTCTCTCCGGTCCTCCCG 128705 Query 198583 GTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCT-T 198641 |||| ||||| ||| | ||||| |||| || ||||| | |||| || || | | Sbjct 128704 GTACCGGTAAGACCTTGCTAGCCAAGGCTACTGCCGGTGAGGCTGGTGTGCCATTCTTGT 128645 Query 198642 CAGTGCTCCGCGGC-GAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCG 198700 | || || | | | |||||| | ||||||||||| ||||| ||| | | || ||||| Sbjct 128644 CCGTT-TCTGGGTCCGAGTTTG-TAGAGATGTTCGTCGGTGTCGGTCCAAGCCGTGTCCG 128587 Query 198701 GGAACTCTTTGAGCAAGCACGTGAA-AATCAA---CCATGTATCATCTTCATTGATGAGA 198756 || | |||| ||| || || || || || || ||||||||||||||||||| Sbjct 128586 AGACATGTTTGC-CAA---CGCCAAGAAGCACGCTCCTTGCATCATCTTCATTGATGAGA 128531 Query 198757 TTGACGCTGTTGGTAAGAAGCGTGG---TGGA-ACTACTACACCTGGTAATGATGAGCGT 198812 | || ||| ||||||||| ||||| ||| | ||| |||||| |||||||| Sbjct 128530 TCGATGCTATTGGTAAGAGCCGTGGAAAGGGAGGCAACT-TTGGTGGTAACGATGAGCGA 128472 Query 198813 GAGCAGACGATTAACCAGCTTCTCACTG-AGATGGATGGTTTTGACAATGAGACTGGTAT 198871 ||| |||| | ||| || || | || ||||||| || || | || ||| | Sbjct 128471 GAGTCGACGCTGAACGAG-TTGTTGGTGCAGATGGACGGCTTCGGCACCGAGGAGCACGT 128413 Query 198872 CGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGG 198931 ||| ||| |||||| ||| || | ||| | || |||| ||| || | ||||| || Sbjct 128412 CGTTGTGCTTGCTGGTACTAACCGACCGGATGTGCTTGATGCTGCTTTGATGCGTCCTGG 128353 Query 198932 TCGATTCGACCG 198943 ||| ||||| || Sbjct 128352 TCGTTTCGATCG 128341 >seq2517 Length=173 Score = 125 bits (138), Expect = 9e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 171892 AAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATT 171951 || || ||||| ||||| || ||||| || ||||| ||||| || |||| |||||||| Sbjct 1 AAGACGATCACTCTCGAAGTCGAGTCCTCGGACACCATCGACAATGTCAAGGCCAAGATC 60 Query 171952 CAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTT 172011 || || |||||||| ||||| || || ||||| ||| | || ||||||||||| || || Sbjct 61 CAGGACAAGGAAGGTATTCCTCCTGACCAGCAGCGATTGATCTTTGCTGGTAAGCAACTC 120 Query 172012 GAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 || || || || || || | || |||||| |||| |||||| Sbjct 121 GAGGACGGCCGCACTCTTTCCGACTACAACATTCAGAAGGAG 162 >seq1240 Length=316128 Score = 96.9 bits (106), Expect = 5e-15 Identities = 254/380 (67%), Gaps = 6/380 (2%) Strand=Plus/Minus Query 182718 TTGAGGAGACTGGGCCAGAAGTAGTCAATCATATTTAGGATCAAGCCCTTAATATGCGAA 182777 ||||| || ||| |||||| ||| | | || | ||| | ||||| || |||||| Sbjct 142869 TTGAGCAGCGAGGGGTAGAAGTGGTCGAGGAAGTTGATGATGAGACCCTTGATGTGCGAA 142810 Query 182778 CCATCGTTATCAGCATCAGTCATAATCATGAGACGACCATACCG-AAGCTCGGATACATC 182836 ||||||| ||| ||| ||||| ||||||| || || || || ||||| | || || Sbjct 142809 CCATCGTGATCCTGATCGGTCATGATCATGATACTGCCGTATCGCAAGCT-GCTGACGTC 142751 Query 182837 TTTGTATTCTTTTCCTTGTTGGAGACCCAATATTTTCTTTAGGTCGTTGAACTCTTGATT 182896 ||| | || || || || ||||| | || | ||| | | |||| ||| ||| Sbjct 142750 GAGGTACTGCTTGCCGTGCTGCAGACCGATGATCTCCTTGATCGCTTTGATCTCGGCATT 142691 Query 182897 -TCCAGTCAACTGGGCCACAGATGCATCTCGGACATTCTTACACTTTCCCCGAAGTGGAA 182955 | || | | ||| | || || || |||||||| | ||| || ||||| || | Sbjct 142690 CTTCA-TGATCTGATCGTGAGTCGCTTCACGGACATTGAGAAGCTTACCACGAAGCGGGA 142632 Query 182956 AGACGCCGTAATGATCCCTTCCAACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCG 183015 | || ||||||| || | || || | || ||||| ||||| || | ||| || | Sbjct 142631 AAACACCGTAATTGTCACGACCCACCTCGACAAGACCAGCCACAGCAAGCGCCTTGGCGG 142572 Query 183016 AGTCACCCTCTGTCACGATGAGTGTACACTTAGAAGATTGGGCTGTC-CCAGCTTTGTTT 183074 ||||||| || || | |||||| || || | | || ||| | ||||| ||||| Sbjct 142571 AGTCACCTTCGGTGAGGATGAGAGTGCAGTCCTTGGCTT-TCCTGCCACCAGCGTTGTTG 142513 Query 183075 GCGTCATCAAGCTTGGGAAT 183094 || || |||||||||||||| Sbjct 142512 GCATCTTCAAGCTTGGGAAT 142493 >seq1493 Length=125577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || | | | || || | || || | || ||| | ||| Sbjct 3747 AAGATGAAGGAGACCGCCTCCGGCTACCTCGGCAAGCCCGTCAAGCACGCCGTTATCACT 3806 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||||||||||| || || || || ||||| || |||||||| | ||| || || Sbjct 3807 GTTCCTGCTTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGACGCCGGTGCCATCGCT 3866 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| || ||| | | ||||| || || || || ||||| ||||||| ||||| Sbjct 3867 GGTCTTGACGTTCTCCGTGTCATCAACGAGCCCACCGCCGCTGCCCTTGCTTACGGTCTC 3926 Query 195842 GAC 195844 ||| Sbjct 3927 GAC 3929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657841463529120