Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq767 125 6e-24 >seq767 Length=52344 Score = 125 bits (138), Expect = 6e-24 Identities = 183/259 (71%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| || ||||| ||||| | || || || | || |||||| |||||| | || Sbjct 47453 TGAGGTCGGTCTCGGGGTTCTTGCAGTCGCCGCAGAGGACGAACTTGTCGATGAAGCTAT 47394 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || || || | | ||| |||||| | ||||||||||||| |||| ||||| | Sbjct 47393 CGAGAAGCTCGCGGAGACGGTCGGCGTCGTGAGCGCCGTTGACGATGTATCGCTCGTTCT 47334 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 | | |||| | || || || || ||||| || || |||||||| || ||||| | Sbjct 47333 TCTCGTCGAACGAGGTCTGAGCACCGAGCTCACATCCAAAGTACTTGGTAGGGTAGGAAG 47274 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||| | |||| || || |||| ||||||| |||||| |||||||| |||| Sbjct 47273 GAGGACGGCTGAGCGAACGAGCAATGTCGGCCATGTTGGGGATGACGGTCTTGATACCGT 47214 Query 34553 TGCCCTTTCCTTCGACCTT 34571 ||||||| ||||||| ||| Sbjct 47213 TGCCCTTGCCTTCGATCTT 47195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828789783178