Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001676635.1_202016-06-25] 15,584 sequences; 24,384,713 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq957 84.2 3e-11 >seq957 Length=1833 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || || ||||| ||||| || || ||||| || || | ||||| ||||| ||||| Sbjct 576 AAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAGCAGCGCCTTATCTTTGCTGGAAAG 517 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || | || || | ||||| | ||||| || || ||||| ||||| || |||||| Sbjct 516 CAGCTCGAAGACGGCCGAACCCTCTCGGATTACAACATCCAAAAGGAATCCACGTTGCAT 457 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 | ||| | || || ||||||||||| Sbjct 456 CTCGTTCTGCGATTGCGAGGTGGTAT 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755308837171200