Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001676635.1_202016-06-25] 15,584 sequences; 24,384,713 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq957 98.7 4e-15 seq17 93.3 2e-13 >seq957 Length=1833 Score = 98.7 bits (108), Expect = 4e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || || || || ||| | || || ||||| || Sbjct 432 ATGCAGATCTTTGTCAAGACGCTCACAGGAAAGACCATCACTTTGGAAGTCGAATCTTCG 373 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || || ||||| || |||||||| ||||||||||| || Sbjct 372 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAG 313 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || ||||| | || ||||| | || |||||| ||||| || | ||||| ||| Sbjct 312 CAGCGATTGATTTTTGCTGGTAAACAGTTGGAGGATGGACGAACTCTGTCTGATTACAAT 253 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| || |||||| | || || Sbjct 252 ATTCAGAAGGAGAGTACTCTTCACCTTGTTTT 221 >seq17 Length=97802 Score = 93.3 bits (102), Expect = 2e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || ||||| |||||||| || ||||| ||| Sbjct 47455 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACTATCACTCTTGAGGTCGAATCCTCT 47514 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || |||| || ||||| |||||||| || ||||| ||||| || Sbjct 47515 GACACCATCGACAACGTTAAGGCCAAGATTCAGGATAAGGAGGGTATTCCCCCTGACCAG 47574 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || |||| || || ||||||||||| | || | | || || || Sbjct 47575 CAGCGCCTTATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGTACCCTTTCCGACTACAAC 47634 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 47635 ATTCAGAAGGA 47645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975323908307072