Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq544 109 1e-18 >seq544 Length=9533 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || || || || |||||||| ||| | ||||| || || |||||| Sbjct 3597 GTTGCCTTTGCGGCCGTAGAGGGTATCTTCTTCTCCGGTTCTTTCGCCTCTATCTTCTGG 3538 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| |||||||||| |||||| ||| |||| || | ||| Sbjct 3537 CTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGCGAC 3478 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || |||||||| |||||| || ||| | || || Sbjct 3477 GAGGGTCTTCACACCGACTTCGCCTGCCTCCTCTT 3443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989466756870885