Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq544 105 6e-18 >seq544 Length=9533 Score = 105 bits (116), Expect = 6e-18 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| ||||| | |||| |||||||| |||||||| ||||| Sbjct 3831 GCTCGACGAGGTTCTCGTTGACGATACCATCGGAAGCAGCGAAGAAGGCGAGGACGTGGG 3890 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| || || |||||||| || || |||| |||||| | || ||||||||| | Sbjct 3891 AGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCATGAAGGTCCTTGGAGA 3950 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||||||||| ||| | ||||| || | | |||||||||||| ||||| |||| Sbjct 3951 GGTCGATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCC--AGAT 4008 Query 110892 CT 110893 || Sbjct 4009 CT 4010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445042952651040