Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq544 104 3e-17 >seq544 Length=9533 Score = 104 bits (114), Expect = 3e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || || ||||| || | || | ||||| || || ||||| Sbjct 3451 GCAGGCGAAGTCGGTGTGAAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAG 3510 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||||||||| |||||||| || || | || ||||| || || ||||| Sbjct 3511 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAACCGGAGAAGAA 3570 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCT 39772 ||| || ||||| || ||||| ||||| || | |||| Sbjct 3571 GATACCCTCTACGGCCGCAAAGGCAACGAGACGCTCT 3607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686829401929080