Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq544 91.5 5e-13 >seq544 Length=9533 Score = 91.5 bits (100), Expect = 5e-13 Identities = 121/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||||| || || || ||||| | || || || | || || ||| |||| ||||| Sbjct 3606 GAGCGTCTCGTTGCCTTTGCGGCCGTAGAGGGTATCTTCTTCTCCGGTT-CTTTCGCCTC 3548 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 ||||||||| | || |||||||| || |||| |||||| ||||| ||||| || || Sbjct 3547 TATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCAT 3488 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 | || ||||||||| | || |||||||||||| || |||| || Sbjct 3487 CTCCCGCGACGAGGGTCTTCACACCGACTTCGCCTGCCTCCTCTTCA 3441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588147818417915