Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq230 84.2 5e-11 >seq230 Length=150239 Score = 84.2 bits (92), Expect = 5e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 165254 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAA 165313 ||| |||||||||||||||||||||||| ||||||||| |||||| |||||||| Sbjct 132424 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 132483 Query 165314 CCCGGTTGGTGTCGTTTGC 165332 |||| ||| ||||||||| Sbjct 132484 CCCGCCTGGGGTCGTTTGC 132502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819961095740