Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq236 109 7e-19 >seq236 Length=132806 Score = 109 bits (120), Expect = 7e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| ||||||||||| | || | |||||| || || ||||| Sbjct 3624 CAAGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGTTCGTTGGAGAAGGTGAGA 3683 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 3684 CCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAG 3743 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAA 33726 || || || || || |||||||||| Sbjct 3744 ATGCCCTCAACGGCGGCAAAGGCAA 3768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815253929440