Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq236 127 3e-24 >seq236 Length=132806 Score = 127 bits (140), Expect = 3e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || ||||||||||| || ||||| Sbjct 3624 CAAGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGTTCGTTGGAGAAGGTGAGA 3683 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 3684 CCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAG 3743 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 || || || || |||||||||||||| || | ||| Sbjct 3744 ATGCCCTCAACGGCGGCAAAGGCAACGAGACGCTC 3778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266124448720