Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 7e-11 >seq24 Length=386750 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 5626 GAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTC 5685 |||||| ||| || ||||||||||| | || || | | || |||||||| |||| Sbjct 118469 GAAATCACTGTCCCCAAAGTTGAACAGAAGGACACCGAGGAGTCCACGGTAGTCTTCGTC 118528 Query 5686 TATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCAC 5745 ||| || || || || ||||||| ||| ||| ||||| ||||||||||| || || Sbjct 118529 TATAACACCGGCACCGGTGTCGATGCCGTGTTTGCTAGCCAGACCGGAGCGGGGCGCGAC 118588 Query 5746 GCGGCCGTAG 5755 ||| |||||| Sbjct 118589 GCGACCGTAG 118598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052838096176