Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq79 349 9e-91 >seq79 Length=472637 Score = 349 bits (386), Expect = 9e-91 Identities = 1142/1747 (65%), Gaps = 62/1747 (4%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || || ||||| ||| | |||||||| || | |||||||| ||| ||| | || Sbjct 421482 GAGCGACCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAG 421423 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAA 363565 ||| || ||||| || || || | || || || || || ||||| |||| | Sbjct 421422 AGCGCCATCGAAACCTACAACCTCAT--GTCGCAGAAGTGCTTTACCCACGCTTCGCCCA 421365 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||| || || || | | || ||| | || || || || || | | |||| Sbjct 421364 CTCTCTTCAACGCCGGGACACCACACCCCCAGCTCTCGTCGTGTTTCCTCGTCACCATGA 421305 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 ||||||| || ||||| || |||| ||||| || |||| ||||| | || ||||||| Sbjct 421304 AGGACGACTCGATCGATGGCATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGA 421245 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 ||| || || || ||| | |||||| | || | || | || ||||| | Sbjct 421244 CTGCCGGTGGTATCGGTCTCAACATCCACTGCATCCGAGGTACTGGCTCGT-ACATTGCC 421186 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 ||||| || | || || | || ||||||||||| || || |||| || || Sbjct 421185 GGCACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTTCGCGTCTTCAACAACACGGCT 421126 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | ||||||||||||||||| ||||| || || ||||| || || | |||||| Sbjct 421125 CGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGAGCCT 421066 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || | ||| | || ||||| || || ||||| || ||| || || ||||| || Sbjct 421065 TGGCACTCGGATGTGTTCGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAGGTG 421006 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 ||||| || || || ||||| ||||| |||||| | |||| || |||||| | || ||| Sbjct 421005 CGTGCCCGAGAGCTCTTCTACGCACTCTGGGTTCCCGACCTCTTCATGAAGAGGGTCGAG 420946 Query 363985 GCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TA 364041 ||| || | ||||| ||| | ||||| |||| || || |||||| |||| || || Sbjct 420945 -CAGAACGGAGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGTCTTGCCGACTGCTA 420887 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT--- 364098 ||| |||||| | || || ||||| || || | ||||| |||| Sbjct 420886 TGG--TGACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGG------TCGTTCC 420835 Query 364099 AAG---ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 ||| || | || |||||||| |||| |||||| | || ||||||| ||||| Sbjct 420834 AAGCGCACCGTCAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACT 420775 Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215 || | || | || | ||||| ||| | |||||||||| ||||||| || |||| Sbjct 420774 GGTAACCCGTTCATCCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTC 420715 Query 364216 GGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 || || || || |||||| ||||||||||| || || |||| || || |||||| Sbjct 420714 GGCACCATCAAGTGCTCCAACCTGTGTACCGAGATCATCGAGTACAGTGCGCCAGACGAG 420655 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT---------GTAA--AAG 364324 || || || |||||||| ||||| ||||| || ||||| || | ||| Sbjct 420654 GTCGCTGTGTGCAACCTTGCCTCGATTGCGCTGCCCACGTTTATCGACCCGGTCACCAAG 420595 Query 364325 ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTAT--CATGCTACTTGCAATCT 364382 | | ||| ||| ||| ||| | | || || | ||| || | | || || Sbjct 420594 ACG-TAC----GACTTTAAGCGTCTCCACAAGGTTGCCAAGGCCAT-CTGCAAG-AACCT 420542 Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442 | ||||| | ||||||| || || || || | ||||| | || || ||||| Sbjct 420541 CAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAAGCTCGCAGATCCAACATGCG 420482 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502 || || || || ||| | ||||| ||||| || ||||||| || ||||| | Sbjct 420481 CCACCGACCCATCGGTATCGGTGTTCAGGGTCTTGCTGACGCCTTCATGATCATGGGCTA 420422 Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562 || || || ||||| || ||||| || || | |||||||||| || || || Sbjct 420421 CGCGTTCGAGTCGCCCGAGGCTCGCCGACTTAACGTGCAGATCTTTGAGACTATTTACCA 420362 Query 364563 TGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG 364621 || || | || | | |||| || |||| || | || | |||| || || | Sbjct 420361 CGCTGCGCTCGAGCGAT-CGTGCGAGCTGGCTCAAGAGCACGGCACGTACGAGACGTACG 420303 Query 364622 AGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTG 364681 || || ||| ||||||||| | | |||| ||| | ||| |||||| ||||| | Sbjct 420302 CCGGCTCGCCTGCTTCGCAGGGTGAGCTGCAGTATGACATGTGGGGTGTCACCCCATCGG 420243 Query 364682 TCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCC 364741 || ||| |||||| | ||| |||| || ||||| ||| ||||||||| Sbjct 420242 ACCTGTGGGACTGGGCTGAGCTCAAGGCCAAGATTGCCAAGCACGGTCTGCGCAACTCCT 420183 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 | | || |||||||| || || || || ||||| ||||| ||||||||||| Sbjct 420182 TGCTCCTCGCCCCCATGCCTACCGCCTCGACGAGTCAGATTCTCGGCTTCAACGAGTGCT 420123 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 | || |||| ||| ||| | || || ||||| || || ||||||| || | ||| | Sbjct 420122 TTGAGCCGTACACATCCAACATCTACTCGCGCCGTGTGCTCGCCGGAGAGTTCCAGGTGG 420063 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 |||| | | || || ||| ||| | || |||||| |||| ||||||| Sbjct 420062 TTAACCCCTGGTTGCTCCGCGAGCTTGTCGAGCAGGGTCTGTGGAACGACACGATGAAGA 420003 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA--AGATC- 364978 || ||||||||| ||| || | ||||| | || || |||| || ||| Sbjct 420002 ACCGCATCATCGCCCACGGTGGCTCGATCCAGAATGTGCCCGGTATTCCCGACCGCATCA 419943 Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAA---CTCTCATTGATATGG 365035 ||||| ||||||| ||||| ||||| || || | || | |||| || |||| Sbjct 419942 AGAAGC---TTTACAAGACCGTGTGGGAGAT---CAGCCAAAAGGCCATCATCGACATGG 419889 Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG- 365094 | ||||| || || || || ||||| ||| |||||| | ||| || || ||| | Sbjct 419888 CCGCCGACCGAGGCGCCTTCATCTGCCAGTCACAGTCGCTCAAC--ATCCACCTCTCGGC 419831 Query 365095 -CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGAC 365153 || |||| | | ||||||| || ||||| || ||||| ||||| || || ||||| Sbjct 419830 TCCCACCTTTGGCCAGCTTACTTCAATGCACTTTTACGGCTGGAAGAAGGGGCTCAAGAC 419771 Query 365154 AGGTGCC 365160 ||| || Sbjct 419770 CGGTACC 419764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348623633036