Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq57 95.1 1e-14 >seq57 Length=374387 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15405 TGGGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGAT 15464 |||||||||||||||| || || ||||| |||||||| | || ||||| ||| | ||| Sbjct 303846 TGGGACCGACGTACTACCAGCGTCTCAAGCACATGGTGGACGATAAGATCCACTCTCGAG 303787 Query 15465 CGCACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTG 15524 ||| |||| |||| || || || ||||| || ||||| | || || | Sbjct 303786 CGCGAGGACCGGTGCAGATCCTGACGCGGCAGCCGGTGGAAGGCCGATCACGTGGAGGCG 303727 Query 15525 GCCTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCC 15584 | || || || ||||||||||| |||||||| | | ||||||| | | |||| Sbjct 303726 GTCTGCGTTTCGGAGAGATGGAGCGCGACTGCATGATCGCGCACGGCATCGCGAGCTTCC 303667 Query 15585 TCAACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGC 15634 |||| ||||| |||||| | ||||||| || || |||||||| Sbjct 303666 TCAAGGAGCGTATGTTTGACGTGTCGGACCCGTACCGCATCCACGTGTGC 303617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611389722564800