Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq112 572 2e-158 seq1 194 2e-44 seq226 190 3e-43 seq247 154 2e-32 seq68 141 1e-28 seq288 98.7 1e-15 seq201 87.8 2e-12 >seq112 Length=645977 Score = 572 bits (634), Expect = 2e-158 Identities = 1062/1548 (69%), Gaps = 18/1548 (1%) Strand=Plus/Plus Query 195278 GAATTGTACATAATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTT 195337 |||| || ||| ||| || | || |||||||||||| | || ||||||||||| ||||| Sbjct 463605 GAATCGT-CATCATGACTAAGGCCATTGGTATCGATCTTGGTACTACTTACTCCTGTGTC 463663 Query 195338 GGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACT 195397 | || |||||||| || ||||| ||| | ||| | || ||||| || ||||| || || Sbjct 463664 GCCGTCTGGCAAAACGACCGTGTCGAGGTCATCGCTAACGACCAGGGTAACCGCACCACC 463723 Query 195398 CCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAG 195457 || || || |||||||| || || || |||||| | |||||||| || || || ||| Sbjct 463724 CCCTCATATGTTGCCTTCACCGACTCGGAGCGTCTCATCGGAGATGCTGCCAAGAACCAG 463783 Query 195458 ACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTT 195517 || |||||||| ||| || ||||| || || |||||||| || ||||| ||||| Sbjct 463784 GTCGCCATGAACCCCCACAACACCGTCTTCGATGCCAAGCGTCTGATCGGTCGTAAGTTC 463843 Query 195518 TCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGT--G 195575 || | || || |||||| ||| ||||| | | || ||| | |||| | Sbjct 463844 GACGACGCCGAGGTTCAGTCCGATATGAAGCACTGGCCCTTCGAGGTTAC-CTCGGTCGG 463902 Query 195576 TGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCG 195635 |||| ||||| ||| | || | | ||||||||||| || |||||| Sbjct 463903 TGGC----AAGCCCCAGATCCGCATCGAGTACAAGGGTGAGAAGAAGACCTTCACTCCCG 463958 Query 195636 AAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTA 195695 | || || || || ||||| | | |||||| ||||| || || | | | | ||| Sbjct 463959 AGGAGATCTCTTCCATGGTTCTCCTCAAGATGCGTGAGACCGCCGAGGCCTACCTTGGTG 464018 Query 195696 AAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGG 195755 || || || ||||| || || || || ||||| ||||| | || || || ||||||| Sbjct 464019 GCACCGTCAAGGATGCTGTCGTCACCGTCCCTGCCTACTTTAACGACTCGCAGCGACAGG 464078 Query 195756 CGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCA 195814 | || ||||| || | | || |||| || || ||| | |||| ||||| || || Sbjct 464079 CTACCAAGGATGCCGGTATCATCTCGGGCCTCAA-TGTGATGCGAATCATCAACGAGCCC 464137 Query 195815 ACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG 195874 || || || || ||||| || ||||| |||||||| | || | || || || || | Sbjct 464138 ACTGCCGCCGCCATTGCCTACGGTCTCGACAAGAAGACCGAAGGCGAGAAGAACGTCCTC 464197 Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 ||||| |||||||| || ||||| ||||||||||| ||||||| ||||| | ||||| Sbjct 464198 ATCTTCGATCTCGGAGGAGGTACCTTTGATGTCTCGCTTCTCACCATTGAGGAGGGTATC 464257 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994 ||||| || |||||||| |||||||| || || || |||||||| || ||||| ||| Sbjct 464258 TTCGAGGTGAAGGCTACCGCTGGTGACACCCACCTTGGTGGTGAGGACTTCGACAACCGT 464317 Query 195995 CTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAA 196053 || || || || ||| | |||||| || ||||| ||||| ||| | | | || Sbjct 464318 CTCGTCAACCACTTCGTC-CAGGAGTTCAAGCGCAAGAACAAGAAGGATCTCACCAGTAA 464376 Query 196054 TCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTC 196113 || | ||||| ||||| || | || || ||||| ||||| || || |||||||| || Sbjct 464377 CGCTCGTGCTCTCCGTCGTCTCCGCACCGCCTGTGAGCGTGCTAAGCGCACTCTCTCATC 464436 Query 196114 TACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAAC 196173 | || || || | | | ||||| || ||| | || || || || |||||||| || | Sbjct 464437 GGCCGCCCAGACCACGATCGAGATCGACTCGCTCTTCGAGGGTATCGACTTCTACACCTC 464496 Query 196174 TATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACC 196233 || |||||||| ||||| || ||| | | ||| | || | | || || || Sbjct 464497 CATCACCCGTGCCCGTTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCACACCATCGAGCC 464556 Query 196234 TGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCT 196293 ||||| | || || |||||| | ||||| || ||| | || | || |||||||| Sbjct 464557 CGTTGAGAAGGTTCTCCGTGACTCCAAGATCGACAAGGGTTCCGTCCACGAGATTGTCCT 464616 Query 196294 TGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAA 196353 ||| || || || |||||||| || || |||| || | ||| || |||||||||| Sbjct 464617 TGTTGGTGGCTCCACCCGTATCCCCAAAGTTCAGAAGCTCCTTACTGACTTCTTCAATGG 464676 Query 196354 TAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCA 196413 || | ||||| |||||||||| || || || || || |||||||| ||||| || Sbjct 464677 CCGCGAGCTCAACAAGTCGATCAACCCCGACGAGGCCGTCGCCTATGGTGCCGCCGTCCA 464736 Query 196414 GGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGATCTTCTGCTACTTGA 196470 ||| || ||||| || || ||||| | | || ||| || ||||| || || || Sbjct 464737 GGCCGCCATTCTTTCGGG---TGACACTTCCGAGAAGACCCAGGACCTTCTCCTTCTCGA 464793 Query 196471 TGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGA 196530 |||||| || | ||| ||||| | || || || |||||||| | ||| | || | Sbjct 464794 TGTTGCTCCTCTCTCCATGGGTATCGAGACCGCTGGTGGTGTCTTCACTCCTCTCATCAA 464853 Query 196531 TAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA 196590 |||||||| ||| | || || |||||| | |||| || || || |||| || || Sbjct 464854 GAGGAACACCACTGTCCCCACCAAGAAGTCTGAGATCTTCTCCACCTACGCCGACAACCA 464913 Query 196591 ACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCT 196650 || ||||| | ||||| || | || || || || | || | ||||| ||| | || Sbjct 464914 GCCCGGTGTGCTGATTCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCT 464973 Query 196651 ACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || |||| ||||| | | || || || |||| || | |||||||| ||||| | Sbjct 464974 CCTCGGAAAATTCGAGCTCTCTGGCATCCCCCCTGCTCCTCGTGGTGTTCCTCAGATCGA 465033 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 || |||||| | || || || | ||||| || || | || | || |||| | | Sbjct 465034 GGTCACCTTCGACGTCGATGCCAACGCCATTCTCAATGTTTCTGCCGCCGAGAAGGGTAC 465093 Query 196771 TGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTC 196818 ||||| ||||| ||||| || ||| |||||||| || || || Sbjct 465094 CGGCAAGTCTGAGAAGATCACCATCCGCAACGACAAGGGCCGTCTCTC 465141 >seq1 Length=1882320 Score = 194 bits (214), Expect = 2e-44 Identities = 181/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| |||||||| || || || |||||||| ||||| ||||| || Sbjct 79213 ATGCAGATCTTTGTGAAGACCCTTACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCG 79272 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || ||||| || || || || || ||| Sbjct 79273 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 79332 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || |||||||| || || ||||| ||||| || || || || ||||| | || |||||| Sbjct 79333 CAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTACAAC 79392 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || |||||||| || || |||||||| || | || || |||||||| Sbjct 79393 ATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCCGTCTGCGTGGTGGTGC 79442 Score = 190 bits (210), Expect = 3e-43 Identities = 183/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || ||| | || || || || || |||||||| || |||| Sbjct 161502 GTGGTATGCAAATCTTTGTCAAGACCTTGACAGGTAAGACCATTACCCTCGAAGTCGAGT 161443 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || ||| |||| ||||||||||| || ||||| || || || || | Sbjct 161442 CTTCGGACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCTG 161383 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| ||||| || ||||| || || ||||| ||||| || || ||||| | || | Sbjct 161382 ACCAGCAGCGACTCATCTTTGCCGGCAAGCAGCTGGAAGACGGCCGCACCCTTTCCGACT 161323 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 ||||| |||| ||||| || ||||| ||||| ||||| | ||||| || ||||| Sbjct 161322 ACAACATTCAGAAGGAATCCACTCTCCACCTCGTTCTCCGTCTTCGTGGCGGTGC 161268 Score = 122 bits (134), Expect = 1e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || ||||| || || || || ||||| |||||||| ||||| || Sbjct 161725 ATGCAGATCTTTGTAAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 161666 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||||||| || ||||| || || || || || ||| Sbjct 161665 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCAG 161606 Query 171982 CAACGACTTATTTTTGCTGG 172001 || ||||| || ||||| || Sbjct 161605 CAGCGACTCATCTTTGCCGG 161586 >seq226 Length=271753 Score = 190 bits (210), Expect = 3e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || || || || || || || |||||||||||||| ||||| || Sbjct 169934 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 169993 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| || || ||||| || ||||| || || ||| Sbjct 169994 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 170053 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| ||||||||||| ||| | |||||||| || |||||| | ||||||||| Sbjct 170054 CAGCGCCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGAACCCTCTCGGATTACAAC 170113 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || || || || || | || || |||||| Sbjct 170114 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCTTCGCCTCCGTGGTGGT 170161 Score = 190 bits (210), Expect = 3e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || ||| | ||||| || || ||||| | ||||| |||| Sbjct 170157 GTGGTATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACTTTGGAGGTCGAGT 170216 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| || || ||| |||| ||||||||||| || |||||||| ||||| || | Sbjct 170217 CTTCAGACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATTCCCCCTG 170276 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | |||||||| || || ||||| || || ||||| || ||||| || || ||| | || | Sbjct 170277 ACCAGCAACGTCTCATCTTTGCAGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCGGACT 170336 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||| |||| |||||||| || | |||||||| || | || || |||||| Sbjct 170337 ATAACATTCAGAAGGAGTCCACCTTGCACCTTGTGCTTCGCCTCCGCGGTGGT 170389 Score = 190 bits (210), Expect = 3e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || || || || || || || ||||| |||||||| |||| Sbjct 170613 GTGGTATGCAGATCTTTGTCAAGACGCTCACAGGCAAGACAATCACGCTCGAGGTCGAGT 170672 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| || || ||| |||| ||||||||||| || |||||||| ||||| || | Sbjct 170673 CTTCAGACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATTCCCCCTG 170732 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | |||||||| || || ||||| || || ||||| || ||||| || || ||| | || | Sbjct 170733 ACCAGCAACGTCTCATCTTTGCAGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCGGACT 170792 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||| |||| |||||||| || | |||||||| || | || || |||||| Sbjct 170793 ATAACATTCAGAAGGAGTCCACCTTGCACCTTGTGCTTCGCCTCCGCGGTGGT 170845 Score = 187 bits (206), Expect = 3e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || ||||||||||| || || ||||| |||||||| |||| Sbjct 170385 GTGGTATGCAGATCTTTGTCAAGACCCTTACTGGTAAGACGATCACACTCGAGGTCGAGT 170444 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || || || ||||||||||||| ||||||||||| || ||||| || | Sbjct 170445 CCTCGGATACTATTGACAATGTCAAAGCCAAGATCCAAGATAAGGAGGGTATTCCTCCTG 170504 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || ||||| || || || || || || ||||| || ||||| |||| | Sbjct 170505 ACCAGCAGCGTCTCATTTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCTGACT 170564 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| | || ||||||||||| || || || ||| | | || || |||||| Sbjct 170565 ACAATATCCAGAAGGAGTCTACGCTCCATCTCGTTTTGCGACTGCGCGGTGGT 170617 Score = 181 bits (200), Expect = 1e-40 Identities = 180/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || || || || || || || ||||| ||||||||||||| Sbjct 170841 GTGGTATGCAGATCTTTGTCAAGACGCTCACAGGCAAGACAATCACGCTCGAGGTTGAGT 170900 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || |||| ||||||||||| || ||||| || ||||| || | Sbjct 170901 CTTCCGACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTG 170960 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | |||||||| || ||||| || || || ||||| || || ||||| || || | |||| Sbjct 170961 ACCAGCAACGTCTCATTTTCGCAGGAAAGCAGCTCGAGGACGGACGGACGCTTTCGGATT 171020 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || ||||||||||| || || || ||| | | || || |||||| Sbjct 171021 ACAACATCCAGAAGGAGTCTACGCTCCATCTCGTTTTGCGACTGCGCGGTGGT 171073 Score = 172 bits (190), Expect = 7e-38 Identities = 178/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || ||| | ||||| || || ||||| | ||||| |||| Sbjct 171069 GTGGTATGCAGATCTTTGTCAAGACCTTGACTGGCAAGACCATCACTTTGGAGGTCGAGT 171128 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| || || || |||| ||||||||||| || |||||||| ||||| || | Sbjct 171129 CTTCAGACACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGTATTCCCCCTG 171188 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | |||||||| || || ||||| || || ||||| || ||||| || || ||| | || | Sbjct 171189 ACCAGCAACGTCTCATCTTTGCAGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCGGACT 171248 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||| || | |||||||| || | || || || ||| Sbjct 171249 ACAACATTCAGAAGGAGAGCACCTTGCACCTTGTGCTCCGTCTCCGTGGCGGT 171301 >seq247 Length=126104 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || || ||||| ||||| ||||| || ||||| ||||| || | || ||| Sbjct 70992 ACAGGTAAGACCATTACCCTTGAGGTGGAGTCCTCGGACACCATCGACAATGTTAAGGCC 71051 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| |||||||| || ||||| ||||| ||||| || || || || || ||||| Sbjct 71052 AAGATTCAGGATAAGGAGGGTATTCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGTAAG 71111 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || |||||| | || |||||| | || |||||||| || || ||| Sbjct 71112 CAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 71171 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| || | || || ||||| Sbjct 71172 CTTGTCCTCCGTCTGCGTGGTGG 71194 >seq68 Length=315608 Score = 141 bits (156), Expect = 1e-28 Identities = 252/363 (69%), Gaps = 5/363 (1%) Strand=Plus/Plus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 ||| | || || || |||| | ||||||||| |||||||||||||| ||||| | Sbjct 18948 TTTACGCCAGAGGAGGTTTCTGCGATGGTGTTGCAGAAGATGAAGGAGACGGCGGAGGCG 19007 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | |||| || | |||| |||| || ||||| || || || || || | |||| | Sbjct 19008 TATTTGGGAAAGAAGGTGACGCATGCCGTGGTGACGGTGCCGGCGTATTTTAATGATGCG 19067 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGC-GGGTCTAAACTGTCTTAGAATTAT 195804 || |||||||||| ||||| || | | | ||||| |||| || ||| | || ||| | Sbjct 19068 CAGAGACAGGCGACTAAGGATGCGGGTACGATTGCTGGGTTGAATGTGT-TGAGGATTGT 19126 Query 195805 CAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAA 195864 ||||| || || ||||| || ||||| ||||| |||| ||||| | | ||| || Sbjct 19127 GAATGAGCCTACTGCGGCAGCGATTGCGTATGGGTTGGATAAGAAGGATGGCGA--ATCG 19184 Query 195865 AAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGA 195924 | ||| | ||| |||| | ||||||||||| || || ||||| || ||| ||| || Sbjct 19185 CAGATTATCG-TCTATGATTTGGGTGGTGGTACCTTCGACGTCTCCCTACTCTCTATCGA 19243 Query 195925 AGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTT 195984 || | |||||||| || || || || || || || || || || ||||| || Sbjct 19244 CTCGGGCGTTTTCGAAGTGCTCGCCACCGCAGGCGACACCCACCTCGGCGGCGAAGACTT 19303 Query 195985 CGA 195987 ||| Sbjct 19304 CGA 19306 >seq288 Length=590259 Score = 98.7 bits (108), Expect = 1e-15 Identities = 245/364 (67%), Gaps = 6/364 (2%) Strand=Plus/Plus Query 182734 AGAAGTAGTCAATCATATTTAGGATCAAGCCCTTAATATGCGAACCATCGTTATCAGCAT 182793 |||||| ||| | | ||| | ||| | ||||| ||||| |||||||||| ||| || Sbjct 298452 AGAAGTGGTCGAGGAAATTGATGATGAGACCCTTGATATGAGAACCATCGTGATCCTGAT 298511 Query 182794 CAGTCATAATCATGAGACGACCATACCG-AAGCTCGGATACATCTTTGTATTCTTTTCCT 182852 | ||||| ||||||| || || || || ||||| | || || |||| || || Sbjct 298512 CGGTCATGATCATGATACTTCCGTAACGCAAGCT-GTTGACGTCAAGATATTGCTTGCCG 298570 Query 182853 TGTTGGAGACCCAATATTTTCTTTAGGTCGTTGAACTCTTGATT-TCCAGTCAACTGGGC 182911 ||||| ||||| | || | ||| | | | |||| || ||| | || | | ||| | Sbjct 298571 TGTTGCAGACCAAGAATCTCCTTGATGGCCTTGATTTCGGCATTCTTCA-TGATTTGGTC 298629 Query 182912 CACAGATGCATCTCGGACATTCTTACACTTTCCCCGAAGTGGAAAGACGCCGTAATGATC 182971 ||| || || ||||| || | ||| || ||||| || || || ||||| | || Sbjct 298630 GTGAGAGGCCTCGCGGACGTTGAGAAGCTTACCTCGAAGCGGGAAAACACCGTAGTTGTC 298689 Query 182972 CCTTCCAACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCGAGTCACCCTCTGTCAC 183031 ||||| || | | || | || ||||| | ||| || |||||||| || || | Sbjct 298690 TCTTCCTACTTCGACAATACCGGACACGGCGAGAGACTTGGCTGAGTCACCTTCGGTGAG 298749 Query 183032 GATGAGTGTACACTTAGAAGATTGGGCTGTC-CCAGCTTTGTTTGCGTCATCAAGCTTGG 183090 |||||| ||||| | | || ||| | ||||| ||||| ||||| || ||||||| Sbjct 298750 GATGAGGGTACAGTCCTTTGCTTTC-CTGCCACCAGCATTGTTGGCGTCCTCCAGCTTGG 298808 Query 183091 GAAT 183094 |||| Sbjct 298809 GAAT 298812 >seq201 Length=205543 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| | | | || || ||||| || | || || | ||| Sbjct 178793 AAGATGAAGGAGACTGCTTCCGGCTACCTCGGCAAGACTGTCAAGCACGCCGTCATCACT 178734 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| ||| || || |||||||| || ||||| |||| ||| || || Sbjct 178733 GTTCCCGCCTACTTCAATGACTCGCAGCGACAGGCCACCAAGGATGCTGGTGCCATCGCT 178674 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || || ||| | | ||||| || || || || || || ||||||| ||||| Sbjct 178673 GGCCTTGACGTTCTCCGTGTCATCAACGAGCCCACCGCCGCCGCCCTTGCTTACGGTCTC 178614 Query 195842 GAC 195844 ||| Sbjct 178613 GAC 178611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859949462560