Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq79 396 3e-105 seq236 145 7e-30 seq226 116 4e-21 seq1 114 1e-20 >seq79 Length=472637 Score = 396 bits (438), Expect = 3e-105 Identities = 1149/1750 (66%), Gaps = 43/1750 (2%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTAT 148111 |||||| |||| ||||| ||||| ||||| |||||||| || |||| |||| Sbjct 419851 CGACTGTGACTGGCAGATGAAGGCGCCTCGGTCGGCGGCCATGTCGATGATGGCCTTTTG 419910 Query 148112 CTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCG 148171 | |||||||| | |||||||| ||| |||||| | |||||||| ||| | Sbjct 419911 GCTGATCTCCCACACGGTCTTGTAAAGCTTCTTGATGCGGTCGGGAATACCGGGCACATT 419970 Query 148172 CTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAG 148231 ||| | |||||| | ||| || | || | || ||| ||| | | || | Sbjct 419971 CTGGATCGAGCCACCGTGGGCGATGATGCGGTTCTTCATCGTGTCGTTCCACAGACCCTG 420030 Query 148232 CTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCG 148291 ||||| || || || || | | || |||||||| ||||| ||||||||||| || Sbjct 420031 CTCGACAAGCTCGCGGAGCAACCAGGGGTTAACCACCTGGAACTCTCCGGCGAGCACACG 420090 Query 148292 CCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 ||| || | |||| || |||| ||||| |||||||| ||| | |||||| Sbjct 420091 GCGCGAGTAGATGTTGGATGTGTACGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGACT 420150 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 |||| || || |||||| || | |||| |||||||||| |||| | || || Sbjct 420151 CGTCGAGGCGGTAGGCATGGGGGCGAGGAGCAAGGAGTTGCGCAGACCGTGCTTGGCAAT 420210 Query 148412 TTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471 ||| ||| || | ||||||||||| || ||| || || || ||||||||| || Sbjct 420211 CTTGGCCTTGAGCTCAGCCCAGTCCCACAGGTCCGATGGGGTGACACCCCACATGTCATA 420270 Query 148472 CTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGC 148531 |||||| || | ||| || ||| |||||| ||||| |||||| | Sbjct 420271 CTGCAGCTCACCCTGCGAAGCAGGCGAGCCGGCGTACGTCTCGTACGTGCCGTGCTCTTG 420330 Query 148532 CGCCAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 ||||| ||||| | |||| |||||||| ||| |||||| ||||| || ||| || Sbjct 420331 AGCCAGCTCGCACGATCGC-TCGAGCGCAGCGTGGTAAATAGTCTCAAAGATCTGCACGT 420389 Query 148591 TGAG-CAGCG-----CCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 | || | ||| | | ||||||| |||| ||| || || |||| Sbjct 420390 TAAGTCGGCGAGCCTCGGGCGACTCGAACGCGTAGCCCATGATCATG------AAGGCGT 420443 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| ||||| || || | || ||||| ||||| |||||||| ||| || Sbjct 420444 CAGCAAGACCCTGAACACCGATACCGATGGGTCGGTGGCGCATGTTGGATCTGCGAGCTT 420503 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGC-GCACCACCACCTTT 148763 ||||| || |||| |||| |||||||||||||| || || ||| | |||| Sbjct 420504 CCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTCTTGCAG-ATGGCCTTG 420562 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTT----GTCATCTA--CGATGCATCGGTTC 148817 | || || | || | ||| |||||| | || | | |||| | | | Sbjct 420563 GCAACCTTGTGGAGACGCTTAAAGTCGTACGTCTTGGTGACCGGGTCGATAAACGTGGGC 420622 Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 | || || ||||| || |||||||| || ||| || || || |||||||| | |||| Sbjct 420623 AGCGCAATCGAGGCAAGGTTGCACACAGCGACCTCGTCTGGCGCACTGTACTCGATGATC 420682 Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937 |||| ||||| ||| ||| ||||| ||| | |||||| || |||||||||| |||| Sbjct 420683 TCGGTACACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 420742 Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAAC 148997 || |||||||| || ||| |||| ||||| || ||||| || | ||| Sbjct 420743 GCAGCATCCTTGTAGAGGATGAACGGGTTACCAGTCTCGGTCTGCGACTCGAGGATGG-- 420800 Query 148998 CGATGCAGGTC--CTGCGCGCGCACT-TGCTGCTCGTAGCGACCCTCCTGCTCGTATAAA 149054 || ||| | ||| || || ||| ||| | | |||||||| |||||| Sbjct 420801 CGTACCAGAGCTTCTGAGCCTTGACGGTGC-GCTTGGAACGACCCTCGGCCTCGTAGCGC 420859 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 || || ||||| ||| | || || ||||| ||| | ||||||||||||| || ||| Sbjct 420860 TCGTAGAGGCGCTCAAACTCGTCACCATAGCAGTCGGCAAGACCGGGGCACTCGTTGGGG 420919 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 |||||||||||||| | |||| | | || | |||||| || || ||||| |||||| Sbjct 420920 CACATGAGCGACCAGTCTCCGTTCTGCTCGACCCTCTTCATGAAGAGGTCGGGAACCCAG 420979 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTT 149233 || ||||| | ||| || || | | ||| || || || ||| ||| |||| Sbjct 420980 AGTGCGTAGAAGAGCTCTCG-GGCACGCACCTCCTCCTTACCGTGGTTCTTGCGGAGGTC 421038 Query 149234 GAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG 149293 ||| | ||| | |||| |||||| ||||||||||| | || | || || || Sbjct 421039 GAGGAACTCGAACACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACG 421098 Query 149294 C---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTC 149350 | ||||| ||||||||||||| ||| || ||||||| || || |||| ||| || | Sbjct 421099 CTTGTTGCCACCCTGGTCGACGTAGCGAGCCGTGTTGTTGAAGACGCGAAGCATGGGCAC 421158 Query 149351 AATGCC---ACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACT 149405 || || ||| || ||||| || | |||| ||| ||| |||| | Sbjct 421159 GATACCGTTGCTGACA---CCGTTGGTGCCGGCAATGTACGA--GCCAGTACCTCGGATG 421213 Query 149406 TTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGC 149465 ||| | ||||| ||||| || ||| | ||| ||||| || ||| ||| Sbjct 421214 CAGTGGATGTTGAGACCGATACCACCGGCAGTCTTGGAGATCATGGCACAGGTCTTGAGG 421273 Query 149466 GTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATT 149525 || ||||||||| ||||| |||| ||||||||| | || || ||||| | | Sbjct 421274 GTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAACACGACGAGAGC 421333 Query 149526 TGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGG 149585 || || | || ||||| ||| | ||||| ||||| ||||| | ||||| Sbjct 421334 TGGGGGTGTGGTGTCCCGGCGTTGAAGAGAGTGGGCGAAGCGTGGGTAAAGCACTTCTGC 421393 Query 149586 CTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCG 149645 ||| | | ||| | |||| ||| || ||||| | ||| ||||| || | |||| Sbjct 421394 GACATGAGGTTGTAGGTTTCGATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCG 421453 Query 149646 ACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAG 149705 || ||||| ||||| ||||| |||||||| | ||| ||| || ||| | |||| Sbjct 421454 ACACGCATGAGCATGTGCTGGGGTCGCTCGGTCACCTTGCCGTTGATGCGGAGGAGGTAG 421513 Query 149706 CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATG 149765 || || |||||| |||||||| | ||||||| |||||||| ||| | ||| Sbjct 421514 GAACGCTCGAGAGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATG 421573 Query 149766 GCGGCGTCGA 149775 || | ||||| Sbjct 421574 GCCGAGTCGA 421583 >seq236 Length=132806 Score = 145 bits (160), Expect = 7e-30 Identities = 349/520 (67%), Gaps = 10/520 (2%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||| ||||| || |||||||| ||||| || || |||||| || || Sbjct 3621 AGGCAAGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGTTCGTTGGAGAAGGTG 3680 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || |||||||| | || | |||||| |||| |||| ||| ||| ||| || ||| Sbjct 3681 AGACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAG 3740 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGC-CGTC--TTG 120816 || | |||||| ||| ||||||||| || | |||||||| || || || |||| | | Sbjct 3741 AAGATGCCCTCAACGGCGGCAAAGGCAACGAGACGCTCGGCGAAGGTAGCGCGTCGGTCG 3800 Query 120817 CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAAC 120876 ||| ||||| | ||||| |||||||| | ||| || || ||||| Sbjct 3801 CTG---ATCCAGCGAAGAGCCCAGTCGGCCTTCTCCTTGACGACGGGGATTGTCTCGACA 3857 Query 120877 GCGTTCAGCAGCATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGATT 120935 |||| | || | ||||||| | ||| || | || || | ||||||||| Sbjct 3858 GCGTCAAAGAGGAACTCGCGCTGCTCGGGCTCGCGGATGTAGGTG-TCGATGAGCAGCGA 3916 Query 120936 GTACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTC 120995 ||| | || |||| | | ||| |||| | || || ||| | | ||||| Sbjct 3917 GTAGGTCTCGCTGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTC 3976 Query 120996 CAGCTCGGGCACCGCCC-GCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGG 121054 | ||||| | |||| | ||||| |||||| || ||||||| ||||| Sbjct 3977 GGCGGCCTGCACCTCGGAGCTGAAACG-CTCGACAAGGTTCTCGTTGACGATACCGTCGG 4035 Query 121055 CGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGT 121114 ||||||||||| || || ||||| ||| ||||| ||||||| || | ||||||| Sbjct 4036 AAGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCGTTGTGATTCAGCTTGT 4095 Query 121115 GCGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154 | |||||| | |||||||||||||| | |||||| Sbjct 4096 TGTCCCAATCGTGAAGATCCTTGGACAGGTCAATCTCCTC 4135 >seq226 Length=271753 Score = 116 bits (128), Expect = 4e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||| | || | | | || || | || Sbjct 170137 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGGGTTCGGCCA-TCTTCCAACT 170079 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || ||||||||||| || || || || |||||||| ||||| Sbjct 170078 GCTTACCAGCAAAGATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCT 170019 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| ||||||| | |||||| |||| ||||| ||| || |||| Sbjct 170018 TGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGG 169959 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||||||| || || || ||||||||| Sbjct 169958 TCAGAGTCTTGACAAAGATCTGCATG 169933 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| | ||| ||||||||||||||| || Sbjct 171042 GTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCGTCCGTCCTCGAGCTGCTTTCCT 170983 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| ||||||| || |||||||| ||||| || || |||||||| ||||| |||| Sbjct 170982 GCGAAAATGAGACGTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTG 170923 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| |||||||| | ||| || |||| |||| || ||||| || || || Sbjct 170922 ACATTGTCAATCGTGTCGGAAGACTCAACCTCGAGCGTGATTGTCTTGCCTGTGAGCGTC 170863 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 170862 TTGACAAAGATCTGCAT 170846 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || || ||| | | | |||||||| ||||| || Sbjct 170586 GTAGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGGCCA-TCCTCGAGTTGCTTTCC 170528 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| ||||| || || ||||| || |||||| || Sbjct 170527 GGCGAAAATGAGACGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTGGCTTT 170468 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | || ||| || |||| |||| || || || || || || Sbjct 170467 GACATTGTCAATAGTATCCGAGGACTCGACCTCGAGTGTGATCGTCTTACCAGTAAGGGT 170408 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 170407 CTTGACAAAGATCTGCAT 170390 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || || || || | |||| | | | |||||||||||||| | Sbjct 170815 GGTGGACTCCTTCTGAATGTTATAGTCCGAGAGCGTGCGGCCA-TCCTCGAGCTGCTTTC 170757 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| || |||||||| || || || ||||||||||| ||||| || Sbjct 170756 CTGCAAAGATGAGACGTTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGAATCTTGGCCT 170697 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | | ||| || |||| |||| || ||||| || || | Sbjct 170696 TGACGTTGTCAATGGTGTCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCTGTGAGCG 170637 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 170636 TCTTGACAAAGATCTGCAT 170618 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || || || || | |||| | | | |||||||||||||| | Sbjct 170359 GGTGGACTCCTTCTGAATGTTATAGTCCGAGAGCGTGCGGCCA-TCCTCGAGCTGCTTTC 170301 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| || |||||||| || || || ||||||||||| ||||| || Sbjct 170300 CTGCAAAGATGAGACGTTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGAATCTTGGCCT 170241 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | | ||| || || | |||| ||| ||||| |||| | Sbjct 170240 TGACGTTGTCAATGGTGTCTGAAGACTCGACCTCCAAAGTGATGGTCTTGCCAGTCAAGG 170181 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 170180 TCTTGACAAAGATTTGCAT 170162 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| || | |||| | | | |||||||||||||| | Sbjct 171271 GGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCA-TCCTCGAGCTGCTTTC 171213 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| || |||||||| || || || ||||||||||| ||||| || Sbjct 171212 CTGCAAAGATGAGACGTTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGAATCTTGGCCT 171153 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | | ||| || || | |||| ||| ||||| |||| | Sbjct 171152 TGACATTGTCAATGGTGTCTGAAGACTCGACCTCCAAAGTGATGGTCTTGCCAGTCAAGG 171093 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 171092 TCTTGACAAAGATCTGCAT 171074 >seq1 Length=1882320 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| ||| ||||||||||||||| | Sbjct 79410 GGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACC-GTCCTCGAGCTGCTTAC 79352 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || ||||| || |||||||| |||||| || Sbjct 79351 CGGCGAAGATAAGTCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCT 79292 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | |||||| || | ||||| ||| || || || || | Sbjct 79291 TGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTAAGGG 79232 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 79231 TCTTCACAAAGATCTGCATG 79212 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || ||||| ||| | ||| ||| || ||||||||||| Sbjct 161301 GTGGATTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCG 161360 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| ||||||||||| || ||||| || |||||||| ||||| |||| Sbjct 161361 GCAAAGATGAGTCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTG 161420 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || |||| ||| | ||| || || |||| || Sbjct 161421 ACGTTGTCAATGGTGTCCGAAGACTCGACTTCGAGGGTAATGGTCTTACCTGTCAAGGTC 161480 Query 133644 TTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 161481 TTGACAAAGATTTGCAT 161497 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| ||||||||||| || ||||| || |||||||| ||||| ||||| | Sbjct 161595 ATGAGTCGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 161654 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||||| | || ||| || |||| |||| ||| |||||||| || || ||||| Sbjct 161655 TCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTTACA 161714 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 161715 AAGATCTGCAT 161725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418999257520