Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq236 102 1e-16 >seq236 Length=132806 Score = 102 bits (112), Expect = 1e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 39658 TTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGC 39717 |||||| || || ||||| || ||||| ||||||||||| |||||||| || |||| || Sbjct 3665 TTCGTTGGAGAAGGTGAGACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAGGC 3724 Query 39718 AAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTC 39771 || || ||||| ||||||||||| || || || ||||| ||||| || | ||| Sbjct 3725 GAAGGAGCCAGAGAAGAAGATGCCCTCAACGGCGGCAAAGGCAACGAGACGCTC 3778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906241264720