Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq236 82.4 7e-11 >seq236 Length=132806 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 4568 ACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626 ||| ||||| | || | || |||||||| || || || | |||||||| | ||| | || Sbjct 3644 ACCCTCGTCAC-GCGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATAAGACCACGCT 3702 Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686 | || ||||| || || | ||| || || ||||| ||||| ||||| || |||||||||| Sbjct 3703 TCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATGCCCTCAACGGCGGCAA 3762 Query 4687 ACGCTAC 4693 | || || Sbjct 3763 AGGCAAC 3769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048049009234