Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq578 86.0 6e-12 >seq578 Length=360407 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 26759 GTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT 26818 |||| ||| ||||| | ||||| ||||| | || || || |||||||| |||| | Sbjct 306393 GTCAGTCAAGATGCAGATCTTTGTTAAAACCCTCACGGGTAAGACGATCACCCTCGAGGT 306334 Query 26819 AGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACC 26878 || || ||||||||||| | ||||| ||||| ||||| ||||| || || Sbjct 306333 CGAGTCTTCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCC 306274 Query 26879 TCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAG 26938 || ||||| || | ||||| | | || || || |||||||||| | | | | | Sbjct 306273 CCCTGATCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGCACCCTTTC 306214 Query 26939 CGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || || || ||||| | || || ||||| Sbjct 306213 GGACTACAACATCCAGAAGGAGTCTACCCTTCACCTCGTCCT 306172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478658133921360