Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq558 95.1 5e-14 >seq558 Length=284561 Score = 95.1 bits (104), Expect = 5e-14 Identities = 191/282 (68%), Gaps = 11/282 (4%) Strand=Plus/Plus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 ||||| || | ||||| |||||||| ||||| || | || || || || || || ||| Sbjct 32146 GATGCCGTCGTCACTGTCCCCGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGAT 32205 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || || ||| | ||| | || ||| | || ||||||||||| ||||| || || || Sbjct 32206 GCCGGTATCATTTCGGGTCTCAACGTTATGCGTATTATTAATGAGCCTACTGCTGCCGCC 32265 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAA-ACAGAA---GaaaaaaaTATTTTAGTATT 451494 | || || || || | | ||||| || ||| || || || || | | || Sbjct 32266 ATCGCTTACGGTCTCG-------ACAAGAAGACCGAAGGTGAGAAGAACGTTCTCATCTT 32318 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| | || ||||| || ||| ||| | ||| ||||||| || || | ||||| Sbjct 32319 CGATCTCGGAGGAGGTACCTTCGATGTTTCGCTCCTTACAATTGAGGAGGGTATCTTTGA 32378 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || ||||| ||| |||||| ||||| || || ||||| || Sbjct 32379 GGTCAAGGCCACCGCTGGTGACACTCACCTTGGTGGTGAGGA 32420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975700351195004