Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq319 114 3e-21 >seq319 Length=680 Score = 114 bits (126), Expect = 3e-21 Identities = 140/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 11700 CATTCCTTCAGGAAAGCTTGGTCGTGATCCCGCTGGAGCCGTCATTGAGTGGCCTTCAAC 11759 |||||| |||||||||||||| || || | ||| || ||||| || | |||||||| Sbjct 651 CATTCCGTCAGGAAAGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAAC 592 Query 11760 TTCAAGCCAAAAAGATGAATCACTGGCTTTTTTGGTCGTACTAATCCAGCATTCTGCATC 11819 |||||||| || | |||||||||||||||||||| | || | ||| | || ||||| Sbjct 591 CTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGT-TTGCTTACCCATCTCTCCGCATC 533 Query 11820 TCTCTCGGTGAATGTGCGAAATTCTGGTGTAAACATTCCAGCCTGAACGTGAGAGAAGAA 11879 | | ||| || || | || | |||| ||||| || |||||||| ||||| || | Sbjct 532 ACCTTTGGTAAAGGTTCTAAGCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAAC 473 Query 11880 TGGGTATTCA 11889 ||||| ||| Sbjct 472 AGGGTACTCA 463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128286913801540