Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq319 1142 0.0 >seq319 Length=680 Score = 1142 bits (1266), Expect = 0.0 Identities = 664/682 (97%), Gaps = 2/682 (0%) Strand=Plus/Minus Query 30854 ACAGCCTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTGGATCCT 30913 |||||||||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct 680 ACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTGGAGCCT 621 Query 30914 GTTGGCGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTT 30973 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 620 GTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTT 561 Query 30974 TTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCAGGCGAG 31033 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 560 TTGGTT-TGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTAGGTGAG 502 Query 31034 AACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGC 31093 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 501 AACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATAC-CACTTCTAAGTGACGGC 443 Query 31094 TGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCT 31153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 TGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCT 383 Query 31154 TCAACGCTAACGTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAATGCATTG 31213 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 382 TCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAATGCATTG 323 Query 31214 ATGCCATTAAATAAAGCACCAACGCCTGACTGTCCCATCCCCATCTTGTCTGCGACAGAT 31273 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 322 ATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCGACAGAT 263 Query 31274 TCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATAGCTTTAAGGCGACGTGCG 31333 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 262 TCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGACGTGCG 203 Query 31334 TCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGTTAAATCTATCAC 31393 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 202 TCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATCTATCAC 143 Query 31394 CGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTAGCGGTGATAAT 31453 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 142 CGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAAT 83 Query 31454 GGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATG 31513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 82 GGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATG 23 Query 31514 CGCTTTGGGCAAACCAAGACAG 31535 |||||||||||||||||||||| Sbjct 22 CGCTTTGGGCAAACCAAGACAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132574877495580