Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq557 105 8e-18 >seq557 Length=340206 Score = 105 bits (116), Expect = 8e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 138174 TGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAAT 138233 |||| || |||| ||||| || || || || ||||||||||| ||||| || |||| Sbjct 231210 TGTTCAGCGACACAGATAGGGCCCACACCGGGTCCTCCACCTCCGTGTGGGATGGAGAAA 231151 Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCA-CCATAGTCACATGGTTTTGCTAGACC 138292 ||||| || || || ||||| ||||| ||| |||| | | ||| || | || | Sbjct 231150 GTCTTGTGCAAGTTGAGATGTGTCACATCAGCACCCATGATGGC-TGGGTTGGTGAGTGC 231092 Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 ||||| || | || || ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct 231091 CACCTGAGCCTGAAGGTTGGCACCGTCGAGATAGACCTGTCCACCGTTGTCATGGACGAT 231032 Query 138353 CT 138354 || Sbjct 231031 CT 231030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993239676760