Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq560 136 3e-27 >seq560 Length=228563 Score = 136 bits (150), Expect = 3e-27 Identities = 216/310 (70%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| || ||||| ||||| | || || || | || |||||| |||||| | || Sbjct 35211 TGAGGTCGGTCTCGGGGTTCTTGCAGTCGCCGCAGAGGACGAACTTGTCGATGAAGCTAT 35152 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || || || | | ||| |||||| | ||||||||||||| |||| ||||| | Sbjct 35151 CGAGAAGCTCGCGGAGACGGTCGGCGTCGTGAGCGCCGTTGACGATGTATCGCTCGTTCT 35092 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 | | |||| | || || || || ||||| || || |||||||| || ||||| | Sbjct 35091 TCTCGTCGAACGAGGTCTGAGCACCGAGCTCACATCCAAAGTACTTGGTAGGGTAGGAAG 35032 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||| | |||| || || |||| ||||||| |||||| ||||||||||||| Sbjct 35031 GAGGACGGCTGAGCGAACGAGCAATGTCGGCCATGTTGGGGATGACGGTCTTGATGCCGT 34972 Query 34553 TGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCG 34612 ||||||| ||||||| ||||| | | | ||||| || ||||||||| ||| Sbjct 34971 TGCCCTTGCCTTCGATCTTGGTGGTAAGAAGAGGCATGCGATATCGGTAGAACTTGTCGT 34912 Query 34613 CCACATTGCG 34622 | |||| ||| Sbjct 34911 CGACATCGCG 34902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838012535509