Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq580 91.5 1e-13 >seq580 Length=301176 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| ||||| |||| | || ||||| ||||| || ||||| Sbjct 41057 GCTCGACGAGGTTTTCGTTGACGATACCGTCAGAAGCGGCGAAGAAGGCAAGGACGTGAG 41116 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| || || |||||||| || || |||| |||||| | || ||||||||| | Sbjct 41117 AGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGAAGGTCCTTGGAGA 41176 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||| || ||| | ||||| || | | |||||||||||| ||||| |||| Sbjct 41177 GGTCGATTTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCC--AGAT 41234 Query 110892 CT 110893 || Sbjct 41235 CT 41236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090433096160