Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001660065.1_202016-06-08] 4,767 sequences; 20,622,051 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4260 84.2 4e-11 >seq4260 Length=107242 Score = 84.2 bits (92), Expect = 4e-11 Identities = 181/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | || || ||||| || || || ||||||||||| || || ||| || || Sbjct 47634 ATGGATGTTGAGGCCGATGCCACCGGCCGTCTTGGAGATCATGGCACAAGTCTTGAGGGT 47693 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 ||| || || || || || ||||| | | | | |||||||||||| || || || Sbjct 47694 ATCGTAGATGCCGTCGATCGAGTCATCCTTCATGGTAACAAGGAAGCACGACGAGAGCTG 47753 Query 94893 -GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 ||||| | || || || || || || || || || |||||||| || | || Sbjct 47754 CGGGTGCGGG-GTACCGGCGTTGAAGAGCGTAGGCGAGGCGTGGGTAAAGTACTTTTGCG 47812 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 |||| || | || || || ||| | | |||||| ||||| ||||||||||| | Sbjct 47813 ACATAAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATGCCGACAGCGA 47872 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTC 95039 | ||||| | ||||| ||| || ||||| Sbjct 47873 CTCGCATGAGCATGTGCTGGGGACGCTC 47900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989523558992485