Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001660065.1_202016-06-08] 4,767 sequences; 20,622,051 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3421 86.0 6e-12 >seq3421 Length=130295 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||| | || || | ||| ||||| | || | |||||||| || || || || || Sbjct 34665 GCTCAACGAGGTTCTCGTTGACGATACCATCCGACGCAGCGAAGAACGCAAGCACATGCG 34724 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | |||| || || ||||||||||| || |||| |||||| | | ||||||||| | Sbjct 34725 AGATAAAGTGGCGCTCATTGTCGTTCAGCTTGTTGTCCCAGTCGTGGAGGTCCTTGGAAA 34784 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 ||||||||| || | ||||| || | | |||||||||||| |||||||| Sbjct 34785 GGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCCAAA 34841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445067877937440