Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001662005.1_202016-06-13] 2,938 sequences; 20,208,930 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2497 84.2 4e-11 >seq2497 Length=103896 Score = 84.2 bits (92), Expect = 4e-11 Identities = 181/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | || || ||||| || || || ||||||||||| || || ||| || || Sbjct 44212 ATGGATGTTGAGGCCGATGCCACCGGCCGTCTTGGAGATCATGGCACAAGTCTTGAGGGT 44271 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 ||| || || || || || ||||| | | | | |||||||||||| || || || Sbjct 44272 ATCGTAGATGCCGTCGATCGAGTCATCCTTCATGGTAACAAGGAAGCACGACGAGAGCTG 44331 Query 94893 -GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 ||||| | || || || || || || || || || |||||||| || | || Sbjct 44332 CGGGTGCGGG-GTACCGGCGTTGAAGAGCGTAGGCGAGGCGTGGGTAAAGTACTTTTGCG 44390 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 |||| || | || || || ||| | | |||||| ||||| ||||||||||| | Sbjct 44391 ACATAAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATGCCGACAGCGA 44450 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTC 95039 | ||||| | ||||| ||| || ||||| Sbjct 44451 CTCGCATGAGCATGTGCTGGGGACGCTC 44478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989546748965790