Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736215.1_202016-09-20] 2,695 sequences; 20,132,962 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq478 113 6e-20 >seq478 Length=43014 Score = 113 bits (124), Expect = 6e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15405 TGGGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGAT 15464 ||||||| |||||||| || ||||| || |||||||| | |||||||| ||| ||||| Sbjct 20197 TGGGACCTACGTACTACCAGCGACTGAAGCACATGGTGGATGACAAGATTCACTCGCGAG 20138 Query 15465 CGCACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTG 15524 ||| |||| |||| || || || |||||| |||||||||| || || | Sbjct 20137 CGCGAGGACCGGTGCAGATTCTGACGCGACAGCCCGTGGAGGGTCGATCGCGCGGAGGCG 20078 Query 15525 GCCTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCC 15584 | || || || |||||||||||| || ||||| | | ||| || | | ||||| Sbjct 20077 GACTGCGATTCGGAGAGATGGAACGTGATTGCATGATTGCGCATGGGATCGCAGGATTCC 20018 Query 15585 TCAACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGC 15634 |||| |||||||||||| | ||| || | || ||| |||||||| Sbjct 20017 TCAAGGAGCGCATGTTTGACGTGTCTGATCCTTACCGCATTCACGTGTGC 19968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611371403732000