Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736215.1_202016-09-20] 2,695 sequences; 20,132,962 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1975 136 3e-27 >seq1975 Length=143732 Score = 136 bits (150), Expect = 3e-27 Identities = 216/310 (70%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| || || || ||||| | || || || | ||||||||| |||||| || | Sbjct 29758 TGAGATCGGTTTCGGGGTTCTTGCAGTCGCCGCAGAGGACAAACTTGTCGATGAAGCCGT 29699 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 ||||||| || | | ||| ||||||| |||||||| ||| | || ||||| | Sbjct 29698 CAAGCAGCTCGCGAAGACGGTCGGCATCGTGGGCACCGTTGACAATGTAACGATCGTTCT 29639 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 | | || | | ||||| ||||| |||||||| ||||| |||| |||||||| ||| Sbjct 29638 TCTCGTCAAACGAGGTTTGGGCGCCGAGCTCGCAGCCGAAAAACTTGGTCGGGTAGGTGG 29579 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||| | || | || || || | ||||||| |||||| |||||||| |||| Sbjct 29578 GAGGACGGCTGAGGGAACGAGCAATGTCAGACATGTTGGGGATGACGGTCTTGATACCGT 29519 Query 34553 TGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCG 34612 ||||||| || |||| ||||| || | ||||| ||| ||||||||| ||| Sbjct 29518 TGCCCTTGCCCTCGATCTTGGTCTGGAGCAGGGGCATGCGGTAACGGTAGAACTTGTCGT 29459 Query 34613 CCACATTGCG 34622 | |||| ||| Sbjct 29458 CGACATCGCG 29449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828040088635