Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736215.1_202016-09-20] 2,695 sequences; 20,132,962 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq999 95.1 8e-15 seq1585 93.3 3e-14 >seq999 Length=205769 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || |||||| || ||||| || || ||||| || || Sbjct 80448 AGACGAAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTACGT 80389 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| || || || | |||||| ||||| ||||| | |||||| Sbjct 80388 CCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCC 80329 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || | || ||||| |||||| || | || Sbjct 80328 TTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGT 80270 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || || ||||| || | || || ||||| |||||||| |||| Sbjct 80269 GATGGTCTTACCCGTGAGGGTCTTGACAAAGATCTGCATCTTGA 80226 >seq1585 Length=212 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||||||| | || || || |||||| || ||||| || || || || || || Sbjct 212 AGTCGCAACACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 153 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| || ||||| ||||| || | |||||| ||||| || || | |||||| Sbjct 152 CCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCC 93 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || | |||||||| |||||| || | ||| Sbjct 92 TTGTCCTGGATC-TTGGCCTTGACATTGTCGATTGTGTCGGAAGACTCCACCTCAAGGGT 34 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAAT 34700 ||||| || ||||| | || || ||||| || Sbjct 33 GATCGTCTTGCCGGTCAGAGTCTTGACAAAGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314719262607935