Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-12 >seq8 Length=117649 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 20445 TAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCC 20504 ||| || || | |||||||||||||| ||||| || ||| | || || ||||| || Sbjct 22511 TAAAAAACAACTCTCGTGTCAAATGTACCAACGTTCTTGCGATTTAGGTCTAGGTGTACC 22570 Query 20505 TTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 |||||| ||||| |||||||| || | || | ||||||||| | || || |||| | Sbjct 22571 TTTCAACATTGCTAGTTATGCTTTGTTGACTTGTATGATTGCTAAAGTGACGGATTGTCA 22630 Query 20565 AACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 | | || || | | ||||| || || || ||| |||| ||||| | ||||| Sbjct 22631 ACCAAAGGAGTTGATTCTTACCATGGGTGATGCTCATGTTTATAAGGATCATGTGGAACC 22690 Query 20625 TTTAAAATTACAGTT 20639 ||||| | ||||| Sbjct 22691 GTTAAAGGTTCAGTT 22705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182808061525