Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq241 221 1e-52 seq180 111 2e-19 >seq241 Length=120793 Score = 221 bits (244), Expect = 1e-52 Identities = 1137/1788 (64%), Gaps = 59/1788 (3%) Strand=Plus/Plus Query 113561 AGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTG 113620 ||| | |||||||| | || | | || ||| | ||||||||||| | || |||||| Sbjct 69251 AGGGTAAACTGAATAGCGCTGGACGCGGGCTTGGTACGGAGGTAGTAAGTTCCAGTCTTG 69310 Query 113621 AGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCC 113680 ||||||| |||||| | || | |||||||||| | || || || ||| | Sbjct 69311 AGCCCCTTCTTCCAACCGTAAAAGTGCATCGAGGTGAGCTGACCGAAGGTGGGAGCTGAA 69370 Query 113681 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCA 113740 | | || ||| | || || || |||||| || || || || ||||| ||| Sbjct 69371 AGGTGGATGTTGAGCGACTGAGACTGGCAGATGAATGCACCTCGGTCGGCAGCCATGTCA 69430 Query 113741 ATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 || | ||||| |||| ||||| || || ||||||| ||||| ||| || ||| Sbjct 69431 ATGATGGCCTTCTGGCTGATCTCCCATACGGTCTTGTAGAGCTTCTTGATACGGTCGGGG 69490 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCATA--- 113854 || | | || ||||| || ||||| | | | |||| | | |||||| Sbjct 69491 ATGCCGGGAACGTTCTGGATCGAACCACCG---TGGGCAATGATGCGGTTCTTCATGGTG 69547 Query 113855 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTT---ATTGACAACA 113911 || || ||| | ||| || ||| ||| ||| | |||||| || Sbjct 69548 TCGTT---CCACAAACCTTGCTCAACGAG---CTCGCGGAGCAACCAGGGATTGACCACC 69601 Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCA 113970 ||||| || ||||| || | ||| || || |||| ||||| || |||||||| Sbjct 69602 TGGAACTCGCCGGCGAGTACACGACG-AGAGTAAATGTTGGAAGTGTAAGGTTCAAAGCA 69660 Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030 ||| ||| ||| | || || || ||||| || ||||| || || | ||| || Sbjct 69661 CTCGTTGAAACCGAGAATCTGACTTGTAGAGGCGGTAGGCATCGGGGCGAGGAGGAGCGA 69720 Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTG----- 114085 || || ||||| | | ||| |||||||| || ||||||| || | Sbjct 69721 ATTGCGCAGACCGTGCTTGGCAATCTTGGCCTTGAGGCCGGCCCAGTCCCAGAGGTCCGA 69780 Query 114086 AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCC 114145 || || | |||| |||| || |||| || ||| || || || ||||| || Sbjct 69781 AGGGGTGACACCCC-----ACATGTCGTACTGAAGCTCACCCTGCGAAGCGGGCGAGCCG 69835 Query 114146 TCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGC 114204 || | |||||||| | ||| | ||| |||| ||| | | |||| |||||||| || Sbjct 69836 GCATAGGTCTCGTAGGTGCCGTGCTCCTGAGCCAGCTCGCACGATCGC-TCGAGGGCGGC 69894 Query 114205 GTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGC 114264 ||| || || |||||||| || || |||| | |||||| || ||||| || Sbjct 69895 GTGGTAGATGGTCTCAAAGATCTGAACATTAAGACGACGAGCCTCGGGCGACTCAAAGGC 69954 Query 114265 G-AGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGA 114322 | || | || | || || | || |||||||| |||||||||| || || || || Sbjct 69955 GTAGCC--CATGATCATGAAGGCGTCAGCGAGACCCTGGACACCGATACCGATGGGACGG 70012 Query 114323 TGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTA 114382 || | ||| || ||| | ||||| ||| |||||||| | || | ||||| | | | Sbjct 70013 TGACGCATGTTGGACCTGCGAGCCTCCTCGACGGGATAGTAGTTGATGTCGATGATCTTG 70072 Query 114383 TTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGA 114442 || | || ||| || |||| | || || || || | | |||| | | Sbjct 70073 TTCAAGTTCTTGCAGATGGCCTTGGCGACCTCGTGGAGACGCTTGAAATCGTAGATTTTG 70132 Query 114443 GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 114502 || | | || | | | || || ||||| || || || || || || | | ||| Sbjct 70133 GTGACGGGGTCGATAAAGGTGGGGAGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCG 70192 Query 114503 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 114562 || || ||||||| || || || || || | || || | ||| |||||||| | | Sbjct 70193 TCGGGGGCACTGTACTCGATGATCTCGGTGCAGAGGTTGGAGCACTTGATGGTGCCAAGG 70252 Query 114563 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTC 114622 ||||| || || ||| || || |||||||| || ||| | || | || ||| Sbjct 70253 TTCTTCTGGTTGCTCTTGCGATTGGCAGCGTCCTTGTAGAGGATGAAGGGGTTACCGGTC 70312 Query 114623 TCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGC 114681 || || || |||| ||| || || | ||||| | || | | || | || ||| |||| Sbjct 70313 TCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGA 70371 Query 114682 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGA 114741 || ||||| ||||||| |||||| ||||| || || || | || | Sbjct 70372 GCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAATTCGTCGCCGTAGCAGTCGGC 70431 Query 114742 GAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTT 114801 ||| || || || | ||||| | ||| ||||| | ||| || |||||| | ||| Sbjct 70432 GAGACCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCACCGTTCTGCTCAACCCTCTT 70491 Query 114802 CATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 114861 ||||||||| || |||| |||||| || ||||||| || || || | || || | Sbjct 70492 CATGAAGAGATCGGGGACCCAGAGGGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTT 70551 Query 114862 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921 || || || ||||| || | || || | || ||||| |||||| || || | ||| Sbjct 70552 TCCGTGGTTCTTACGCAGGTCGAGGAACTCAAAGACATCCGAGTGCCAAGGCTCAATGTA 70611 Query 114922 CACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGC 114975 | || | | || | |||| |||| |||||| || || | || ||| Sbjct 70612 GATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGGTCGACGTAGCGAGCCGTGTT 70668 Query 114976 ATTAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAA-- 115031 ||||| || |||||||| || | |||||| | | || |||||| || || || Sbjct 70669 GTTAAAGACACGAAGCATGGGTACGATACCGTTGCTGA--CGCCATTGGTACCGGCAATG 70726 Query 115032 TACGAGACTTATTGGCTCTGACATCA-TGGATGTGCATACCAATACCCCCTGCCCACTTT 115090 || || || | | | || || ||||||| | |||||| || || || ||| Sbjct 70727 TAGGA-ACCGGT--ACCCCGAATGCAGTGGATGTTGAGACCAATGCCACCGGCGGTCTTG 70783 Query 115091 GAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTT 115150 ||||| ||||| | ||||| || |||| || |||||||||||||| |||| | Sbjct 70784 GAGATCATGGCGCAGGTCTTGAGAGTGTCGTAAATGCCGTCGATCGAGTCGTCCTTCATG 70843 Query 115151 GCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGT 115210 | || ||||| || ||| | ||||| || ||||| |||||||||||||| || Sbjct 70844 GTGACGAGGAAACACGACGAGAGCTGTGGGTGGGGAGTACCGGCGTTGAAGAGGGTGGGG 70903 Query 115211 GTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAAT 115269 | |||||| | || ||| ||| ||||| | ||||||||| | | | || Sbjct 70904 GAAGCGTGGGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCGATGGCACTCTCGAT 70962 Query 115270 GTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 ||| | ||||| ||||| | | || ||||| | ||||| ||||| Sbjct 70963 GTCCTGGCCGTGGATACCAACAGCAACACGCATGAGCATGTGCTGGGG 71010 >seq180 Length=182808 Score = 111 bits (122), Expect = 2e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || || || |||||||||||||| || || |||||| || || Sbjct 14568 GGCAAAGTCGGTGTGAAGGCCTTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 14627 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || || || ||||||||||| Sbjct 14628 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAGAT 14687 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| || || || |||| |||||| || ||||||| Sbjct 14688 ACCCTCGACGGCAGCAAAGGCAACGAGACGTTCGGCAAAGG 14728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351770604600